Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0875
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.21 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.85 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   3.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +1

Query: 178 GGVISVVVAKKNNHYAVSSFEGEGGYFESTQNWKVV--EPAAGGYAYGELTFPSRTALRE 351
           GG+   + +         + E E   F S   W ++  EP+A    +   +       +E
Sbjct: 480 GGITRDISSLVVQEQPTPTTESEERRFFSFHQWGILVYEPSACRPRHEIRSTDVIPGTQE 539

Query: 352 HVAGLRGGAGAWGDAVPV 405
           HV G++G   +WG A+ V
Sbjct: 540 HVCGVKGIPCSWGRAINV 557


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 253 YFESTQNWKVVEPAAGGYAYGELTFPSRTALRE 351
           ++    +W  + P A G+  GELT+      R+
Sbjct: 433 WYSLASSWPALVPLALGFLAGELTYSQEIGDRQ 465


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 304 SRLQPVQPPSSFVCSQSI 251
           S ++PV P  S VCS  +
Sbjct: 23  STVEPVDPVKSLVCSPDL 40


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 217 HYAVSSFEGEGGYFEST 267
           HY V S EG  G+F+ T
Sbjct: 121 HYGVYSCEGCKGFFKRT 137


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 217 HYAVSSFEGEGGYFEST 267
           HY V S EG  G+F+ T
Sbjct: 121 HYGVYSCEGCKGFFKRT 137


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +1

Query: 304 YAYGELTFPSRTALREHVAGLRGGAGAWG 390
           Y  GE+T P  T      A   GGAG  G
Sbjct: 576 YRNGEVTTPLFTPAVGVAAASAGGAGGGG 604


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 217 HYAVSSFEGEGGYFESTQNWKV 282
           HY V S EG  G+F  +   K+
Sbjct: 78  HYGVHSCEGCKGFFRRSIQQKI 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,663
Number of Sequences: 438
Number of extensions: 2284
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)