Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0875
(434 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 31 0.44
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 31 0.44
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 31 0.44
At5g67180.1 68418.m08469 AP2 domain-containing transcription fac... 28 3.1
At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SD... 27 4.1
At1g30780.1 68414.m03763 F-box family protein 27 5.5
At3g14370.1 68416.m01818 protein kinase family protein contains ... 27 7.2
At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative 27 7.2
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 27 7.2
At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR ... 26 9.5
At2g37800.1 68415.m04641 DC1 domain-containing protein contains ... 26 9.5
At2g22990.5 68415.m02735 sinapoylglucose:malate sinapoyltransfer... 26 9.5
At1g26150.1 68414.m03192 protein kinase family protein similar t... 26 9.5
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -1
Query: 179 PRWSTMGVPAMYRFADSKVGAHRHCARCPSLDTISMRLALFMKTLENKSENQQAATT 9
P W G+P + R D + G+ L + M F + LEN +E + T
Sbjct: 324 PTWKAFGIPLVSRLCDVENGSDVENLYLKLLSSFKMPTEFFTENLENPTEEEATDKT 380
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -1
Query: 179 PRWSTMGVPAMYRFADSKVGAHRHCARCPSLDTISMRLALFMKTLENKSENQQAATT 9
P W G+P + R D + G+ L + M F + LEN +E + T
Sbjct: 324 PTWKAFGIPLVSRLCDVENGSDVENLYLKLLSSFKMPTEFFTENLENPTEEEATDKT 380
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1) (NR2)
{Arabidopsis thaliana}
Length = 917
Score = 30.7 bits (66), Expect = 0.44
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 253 YFESTQNWKVVEPAAGGYAYGELTFPSRTALREHVA-GLRGGAGAWG-DAVPVLRGGTSP 426
Y + + W VVE A G+AY F S +REH+ GL G A A P+++ P
Sbjct: 843 YPDRLKVWYVVESAKEGWAY-STGFISEAIMREHIPDGLDGSALAMACGPPPMIQFAVQP 901
Query: 427 RL 432
L
Sbjct: 902 NL 903
>At5g67180.1 68418.m08469 AP2 domain-containing transcription
factor, putative similar to (SP:P47927) Floral homeotic
protein APETALA2. [Mouse-ear cress] {Arabidopsis
thaliana}
Length = 352
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 203 RRKTTTMPSPPSRVKADTLRAHKTGRWLNRL 295
RR++T P S+ + TL HK GRW +RL
Sbjct: 176 RRQSTGFPRGSSKYRGVTL--HKCGRWESRL 204
>At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 317
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 58 NRAKRILIVSSDGHLAQWRCAPTFESAN 141
NR RI+IVSS+GH +R F+ N
Sbjct: 160 NREGRIVIVSSEGHRFAYREGVQFDKIN 187
>At1g30780.1 68414.m03763 F-box family protein
Length = 482
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 106 QWRCAPTFESANRYIAGTPIVDQRGGV-ISVVVAKKNNHYAVSSFEGEGGYFESTQNWKV 282
Q RC P F R++ PI DQ+ + +SV K+N + V + G G Q W+
Sbjct: 283 QSRC-PKFPVNTRFVGYDPIDDQQKALSVSVPSRKRNLEHKVLTLGGGG------QGWRH 335
Query: 283 VE 288
+E
Sbjct: 336 IE 337
>At3g14370.1 68416.m01818 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 480
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Frame = -3
Query: 174 LVDDGRAGDVP--VRRLEGRRAP--PLR----QVPVA*HYQYALGSVYEDLR 43
L+D GD+ +R+ G R P P+R +V VA Y +A+G VY DL+
Sbjct: 164 LIDYAPNGDLHSLLRKQPGNRLPIQPVRFFAAEVLVALEYLHAMGIVYRDLK 215
>At2g37810.1 68415.m04642 CHP-rich zinc finger protein, putative
Length = 233
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -1
Query: 167 TMGVPAMYRFADSKVGAHRHCARCPSLDTISMRLALFMKTLENKSEN 27
T G YR A H HCA CP M ++ N SEN
Sbjct: 36 TYGFGKTYRCAPCDYVLHDHCATCPFTLISFMHPQHELRLFVNGSEN 82
>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain
Length = 286
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 146 YRFADSKVGAHRHCARCPSL 87
YR +D H +CA CPS+
Sbjct: 39 YRCSDCDYDLHEYCATCPSI 58
>At5g35450.1 68418.m04215 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 901
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 306 IAACSRFNHLPVLCALKVSAFTLEGG 229
I + SRF LP+L L +S+ EGG
Sbjct: 558 IQSASRFQSLPLLRVLDLSSVKFEGG 583
>At2g37800.1 68415.m04641 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 396
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 167 TMGVPAMYRFADSKVGAHRHCARCPS 90
T G YR H HCA CPS
Sbjct: 170 TYGFGKTYRCTRCDYNLHDHCATCPS 195
>At2g22990.5 68415.m02735 sinapoylglucose:malate sinapoyltransferase
(SNG1) similar to serine carboxypeptidase I precursor
(SP:P37890) [Oryza sativa]; contains Pfam profile
PF00450: Serine carboxypeptidase; identical to cDNA
sinapoylglucose:malate sinapoyltransferase (SNG1)
GI:8699618
Length = 433
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 82 VSSDGHLAQWRCAPTFESANRYIAGTPI 165
+ + GH A++R TF R+I+G P+
Sbjct: 406 IKASGHTAEYRPNETFIMFQRWISGQPL 433
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 417 APPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLP 313
+PP+H PP S P PRH+ + + R S P
Sbjct: 178 SPPRHLPS-PPASEIPPPPRHLPSPPASERPSTPP 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,044,019
Number of Sequences: 28952
Number of extensions: 185810
Number of successful extensions: 588
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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