Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0874
         (533 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA...    45   0.001
UniRef50_UPI00015B5AD4 Cluster: PREDICTED: similar to GA12584-PA...    44   0.002
UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2 ...    32   7.2  
UniRef50_Q2LR42 Cluster: Putative Holliday junction resolvase; n...    32   7.2  
UniRef50_Q897X5 Cluster: Gamma-D-glutamyl-L-diamino acid endopep...    32   9.5  
UniRef50_Q2JL62 Cluster: Putative uncharacterized protein; n=2; ...    32   9.5  

>UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13868-PA - Tribolium castaneum
          Length = 438

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +3

Query: 303 GSWPADHXXXXXXXXXXXXXXHL--TLRQYEELVAKAEVLLSRLVVSENYDSISNFLTHY 476
           GSWP DH              +   TL  +E L AK E+ + RL+   NY+++ NF+  Y
Sbjct: 77  GSWPIDHPLPLPRWSCKSQKCYQLETLTHFENLAAKIELHVQRLLEEHNYNTVGNFIDLY 136

Query: 477 DAYMASPIDTLKEFYQKY 530
             +  S      +++Q Y
Sbjct: 137 QNFKKSGCCNFFKYFQSY 154


>UniRef50_UPI00015B5AD4 Cluster: PREDICTED: similar to GA12584-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA12584-PA - Nasonia vitripennis
          Length = 396

 Score = 44.4 bits (100), Expect = 0.002
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +3

Query: 372 TLRQYEELVAKAEVLLSRLVVSENYDSISNFLTHYDAYMASPIDTLKEFYQKY 530
           T+ QYEEL +  E+   RL+    YD++ N L  Y  +  S    L+ FY+KY
Sbjct: 60  TVEQYEELASSVELETQRLLRERRYDTVDNVLRFYRDFKKSGESNLEHFYRKY 112


>UniRef50_UPI0000E2029A Cluster: PREDICTED: LIM domain binding 2
           isoform 1; n=1; Pan troglodytes|Rep: PREDICTED: LIM
           domain binding 2 isoform 1 - Pan troglodytes
          Length = 344

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 366 HLTLRQYEELVAKAEVLLSRLVVSENYDSISNFLTHYDAYMASPIDTLKE-FYQKY 530
           H T+RQY ELV ++ + +   V+ E    +   ++ +  Y  SP D LK   +QK+
Sbjct: 159 HFTIRQYRELVPRSILAMHLCVILE---PMQELMSRHKTYNLSPRDCLKTCLFQKW 211


>UniRef50_Q2LR42 Cluster: Putative Holliday junction resolvase; n=1;
           Syntrophus aciditrophicus SB|Rep: Putative Holliday
           junction resolvase - Syntrophus aciditrophicus (strain
           SB)
          Length = 150

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -1

Query: 398 DQLLVLTESE-VQSRTGCPPARRRQGVVGRPATGIIL 291
           D+ L   E+E + SR+G PP R+R+GVV R A  +IL
Sbjct: 93  DETLTTKEAEEILSRSGVPP-RKRRGVVDRLAASLIL 128


>UniRef50_Q897X5 Cluster: Gamma-D-glutamyl-L-diamino acid
           endopeptidase I; n=7; Clostridium|Rep:
           Gamma-D-glutamyl-L-diamino acid endopeptidase I -
           Clostridium tetani
          Length = 423

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 414 LLSRLVVSEN-YDSISNFLTHYDAYMASPIDTLKEFYQKYN 533
           L++  +V EN Y ++  +L+ YD Y   P DT  +  +KYN
Sbjct: 51  LIADGIVGENTYRALGRYLSGYDVYTIRPGDTFYKIAKKYN 91


>UniRef50_Q2JL62 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain JA-2-3B'a(2-13))
           (Cyanobacteria bacteriumYellowstone B-Prime)
          Length = 422

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 500 DRGSHVSVVVRQEVANGIIVFGNHETTQQYLGFGDQLLVLTESEVQSRTGC 348
           D   + +V + Q V + + +F N  TT +YL   D+ +VL E +V    GC
Sbjct: 15  DEFPYPNVPIEQTVTDNLALFANSLTTARYL--RDRKVVLPEGKVMLNAGC 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,962,356
Number of Sequences: 1657284
Number of extensions: 7464555
Number of successful extensions: 23626
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23622
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)