Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0874
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    28   0.045
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   9.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 28.3 bits (60), Expect = 0.045
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 124 MSSLNGFIFNISIVWLEAERRRCPFSEFVVCLL 26
           M +++G ++ I+ VW+     RC FSEF+  LL
Sbjct: 723 MIAVSGLVY-IATVWICTLMNRCKFSEFMTKLL 754


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 431 HETTQQYLGFGDQLLVLTESEVQSRTGCPP 342
           H+T   Y     Q   +T++ V   TG PP
Sbjct: 127 HQTQVVYASCKLQAAAVTQNGVLGPTGSPP 156


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 56  ASSSLGFQPNNGYVKY 103
           A +S G QP  GY  Y
Sbjct: 54  AWTSAGLQPTTGYYPY 69


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 533 VIFLVKFFQGVDRGSHVSVVVRQEVAN 453
           VIF++    G   G  +  ++R+E+AN
Sbjct: 249 VIFILWHIVGTFSGIFLCDLIRREIAN 275


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,386
Number of Sequences: 336
Number of extensions: 1678
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)