Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0871
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.2  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   7.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.8  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 104 WQ*KSLTHIRIILSNSKVMLSCHMIWPS 21
           W+ KS T + +     +  + C M WPS
Sbjct: 763 WELKSSTIVMMTRLEERSRIKCTMYWPS 790


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +3

Query: 120 HRTQLIVSIYCRPWTSANFRGTAELLP 200
           HR  L   IYCR W   + +   EL P
Sbjct: 93  HRKGLPHVIYCRVWRWPDLQSHHELKP 119


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 246  YIYIYFVFF 220
            Y+Y+YFVFF
Sbjct: 1539 YMYLYFVFF 1547


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,925
Number of Sequences: 2352
Number of extensions: 13834
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)