Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0871
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF272898-1|AAF78078.1|  608|Homo sapiens PR-domain zinc finger p...    30   7.1  

>AF272898-1|AAF78078.1|  608|Homo sapiens PR-domain zinc finger
           protein 6 isoform A protein.
          Length = 608

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 332 CEEQNIPLIRYRKRIYIRATCDI 400
           C EQN+ +++YR  I+ RA  DI
Sbjct: 345 CGEQNLTVVQYRSNIFYRACIDI 367


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,279,670
Number of Sequences: 237096
Number of extensions: 1778529
Number of successful extensions: 2532
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2532
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)