Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0868
         (485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IDF9 Cluster: Putative uncharacterized protein PF13_0...    37   0.21 
UniRef50_A7QB66 Cluster: Chromosome chr4 scaffold_73, whole geno...    35   1.1  
UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein MAL7P1...    33   2.6  
UniRef50_A4KBM7 Cluster: Capsid protein; n=16; Circovirus|Rep: C...    33   4.5  
UniRef50_UPI0001597D25 Cluster: hypothetical protein RBAM_034600...    32   6.0  
UniRef50_A2TR54 Cluster: Putative uncharacterized protein; n=1; ...    32   6.0  

>UniRef50_Q8IDF9 Cluster: Putative uncharacterized protein
           PF13_0285; n=2; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0285 - Plasmodium falciparum (isolate 3D7)
          Length = 803

 Score = 37.1 bits (82), Expect = 0.21
 Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 483 QIFILSFLFILSN-NMRYFFNLINVCFGLVRQHFNLFSHFPMHHNPYLHFISHFNK 319
           Q FI S  F   N  +  F   IN  F L++ +FNLF  FP +H  YL FIS   K
Sbjct: 713 QNFIKSIYFCSHNCTISMFSRSINYIFLLLKNNFNLFL-FPYNHAKYLSFISFLAK 767


>UniRef50_A7QB66 Cluster: Chromosome chr4 scaffold_73, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr4 scaffold_73, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 728

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 209 FIFWVFKFQYPLQLNIFVDCSVTYL---LQFRCFSHLFLNIFQRLFH 78
           FIFWVF F++       +   V YL   LQF    +L   ++ +LFH
Sbjct: 682 FIFWVFSFRFASYPKFIITSDVLYLTFSLQFFLCDYLLFLLYTKLFH 728


>UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein
           MAL7P1.142; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.142 - Plasmodium
           falciparum (isolate 3D7)
          Length = 418

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = -3

Query: 480 IFILSFLFILSNNMRYFFNLIN-VCFGLVRQHFNLFSHFPMHHNPYLHFISHFNKFWH 310
           +  +SFL+ L + + + + L++ + F     HF  F +F +H   + +F+ HF  F++
Sbjct: 18  VHFISFLYFLVHFISFLYFLVHFISFFYFLVHFISFFYFLVHFISFFYFLVHFISFFY 75


>UniRef50_A4KBM7 Cluster: Capsid protein; n=16; Circovirus|Rep:
           Capsid protein - Columbid circovirus
          Length = 274

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -1

Query: 224 PKKKLFIFWVFKFQYPLQLNIFVDCSVTYLLQFRCFSHLFLNI 96
           P K ++    F + +P    ++ +C VTY ++FR F+   LN+
Sbjct: 195 PTKVIYYGMAFSYLHPAPDPMYYECEVTYYVKFRQFAWTALNV 237


>UniRef50_UPI0001597D25 Cluster: hypothetical protein RBAM_034600;
           n=1; Bacillus amyloliquefaciens FZB42|Rep: hypothetical
           protein RBAM_034600 - Bacillus amyloliquefaciens FZB42
          Length = 179

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -3

Query: 213 IVYFLGFQVSISTAT*YICRLFSNIPITI*MFLSSVFKYFSTSFPLLNCF 64
           I+ FLG Q+ I T   Y   +FSNIP+ I  FL S FK      P  + F
Sbjct: 82  IINFLGAQIKIKTF--YSLFMFSNIPVAIKFFLIS-FKNIFAEHPNTSLF 128


>UniRef50_A2TR54 Cluster: Putative uncharacterized protein; n=1;
           Dokdonia donghaensis MED134|Rep: Putative
           uncharacterized protein - Dokdonia donghaensis MED134
          Length = 574

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = -3

Query: 480 IFILSFLFILSNNMRYFFNLINVCFGLVRQHFNLFSHFP--MHHNPYLHF 337
           +  + +LF +  N R +F L  +C G++     L S FP  + HN +LHF
Sbjct: 156 LLAIEYLFDVKINGRRYFQLFLLCLGIINTWVYL-SDFPKEIQHNIHLHF 204


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,937,170
Number of Sequences: 1657284
Number of extensions: 7005929
Number of successful extensions: 15310
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15286
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)