Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0864
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0463 - 3424951-3425065,3425191-3425258,3425362-3425586,342...    36   0.020
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419...    28   5.4  
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949...    27   9.4  

>01_01_0463 -
           3424951-3425065,3425191-3425258,3425362-3425586,
           3425669-3425804,3425905-3426107,3426227-3426340,
           3426432-3426506,3426625-3426783,3426868-3427038,
           3427227-3427274,3427366-3427491,3427611-3427718,
           3427800-3427913,3428320-3428496
          Length = 612

 Score = 36.3 bits (80), Expect = 0.020
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +2

Query: 380 KIMKSKLMKLPNWYQIPLINSNASHNLTDGNLVRFRGMIQDMHNPEFYFEKFE 538
           ++ +S L +     ++P+++ +    +    LVRFRGM+QDM   EFY   F+
Sbjct: 45  EVFRSFLFEQGGLDKVPVLDESNLGLIKPNTLVRFRGMVQDMLGNEFYVGAFK 97


>02_01_0570 -
           4195409-4195443,4196245-4196333,4196539-4196630,
           4196726-4196833,4196984-4197118,4197211-4197256,
           4197358-4197458,4198285-4198422,4198503-4198601,
           4198740-4198856,4199195-4199356,4199734-4199793,
           4200371-4200538,4200608-4200718,4201401-4201499,
           4201579-4201644,4202407-4202490,4202563-4202605,
           4202684-4202739,4202817-4202925,4203442-4203524,
           4203842-4203925,4204311-4204382,4204462-4204539,
           4204633-4204716,4204806-4204876,4205943-4206012,
           4206495-4206626,4207168-4207284,4208185-4208367
          Length = 963

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 510 TLNFTLRNLKYLTQQQMK*RLKVENTEILHMF 605
           TLNF  R+L +LTQ  +    KV+NT I + F
Sbjct: 821 TLNFRGRDLLHLTQDTLDHANKVKNTFIFNTF 852


>02_05_1152 +
           34494423-34494586,34494725-34494781,34494851-34494908,
           34494989-34495088,34495270-34495383,34495588-34495810,
           34496112-34496246,34496575-34496679,34496906-34497001,
           34497387-34497516,34497933-34497983,34498538-34498648,
           34499267-34499376,34499490-34499655,34499740-34499820,
           34499907-34499975,34500099-34500212,34500699-34500760,
           34500894-34500990,34501152-34501271
          Length = 720

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 524 FEKFEVFNTTTNEVKVKSGKYRDTAHV 604
           FE+F  F+  + +  VKSGK  D  HV
Sbjct: 349 FERFSYFSRASLDYIVKSGKQPDVLHV 375


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,018,350
Number of Sequences: 37544
Number of extensions: 245002
Number of successful extensions: 537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)