Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0864
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical pr...    32   0.40 
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm rece...    29   3.7  
Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U40422-5|AAA81448.2|  494|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z78414-2|CAB01668.3|  308|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AF026206-1|AAK39306.1|  260|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z81117-5|CAB03321.1|  279|Caenorhabditis elegans Hypothetical
           protein T06E6.11 protein.
          Length = 279

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 118 LRVLSCTILNMYVLLRYCNNFVI*CTVRYDNESLVPNSC 2
           L +L+C + N Y+L  YC N VI   +  DN     N C
Sbjct: 130 LFLLACALFNQYILFGYCRN-VIDVPLECDNFKCTVNEC 167


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
 Frame = +2

Query: 317 MHENIMSDIETTTPDRWIENEKIMKSKLMKLPNWYQIPL-INSNASHNLTDGNLVRFRGM 493
           +H+ I+ D E    +  +EN +IMK + +K    ++    IN +A++ LTD  + +F  +
Sbjct: 431 VHKRILKDKEQCIEE--LEN-RIMKLETLKETETFEEKREINKSATNELTDMEISKFSKI 487

Query: 494 IQDMHNPEFYFEKFEVFNTTTNEVKVKSGKYRDTAHVSENEKIN 625
           I    N   + E    F    N V     +Y+  +    NE+I+
Sbjct: 488 IATGKNARKWNEMKVQFERIDNIVNGLEARYQSMSE-KVNEEIS 530


>Z69716-2|CAA93527.1|  474|Caenorhabditis elegans Hypothetical
           protein C04B4.2 protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = +2

Query: 377 EKIMKSKLMKLPNWYQIPLINSNASHNLTDGNLVRFRGMIQDMHNPEFYFEKFEVFNTTT 556
           ++  KSKL+K P   QIPL+N+ A      G     +   + + NP   ++ +      T
Sbjct: 303 QRHQKSKLLKHPPGLQIPLLNTRAQ---ALGQASMHQQQQEHISNPYQGYQPYLHREDMT 359

Query: 557 NEVKVKSGKYRDTAH 601
           N +K  +G   D A+
Sbjct: 360 NGMKKPTGTLIDGAN 374


>AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical
           protein T05G11.2 protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 172 FTLLFETY*ILLISEKSMLRVLSCTILNMYVLLRYCNNFV 53
           F +LF  Y     +      +L C ++N YVL  YC N +
Sbjct: 112 FPVLFYKYRCKTSTIMIYTSILICGLINQYVLFGYCGNVI 151


>AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 85 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 254 TESEFIKVQSHQ*Y--RTVLHFFFCGFC*LYFTL*NIL 147
           TE+ F+    +Q Y  R++   F  GFC +Y+TL  +L
Sbjct: 66  TETSFVVFNVYQGYVSRSLAPIFLLGFCAIYYTLITLL 103


>Z81453-4|CAB03794.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.6 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 172 FTLLFETY*ILLISEKSMLRVLSCTILNMYVLLRYCNNFVI*CTVRYDNESLVPNSC 2
           F + F  Y   L +   +L +LS  + N Y+L  YC N V+   +   N     NSC
Sbjct: 112 FPIFFHIYRQKLPNFVFLLIILSSELFNQYMLFGYCGN-VLETPLECVNYFCAVNSC 167


>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein
            F39B1.1 protein.
          Length = 1607

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +2

Query: 479  RFRGMIQDMHNPEFYFEKFEVFNTTTNEVKVKSGKYRDTAHVSENEKINYSE 634
            ++  ++Q+   P+ Y + + V     N+ K K+   R T H + N+ +NY+E
Sbjct: 1497 KYLALLQNNQQPDPYVKTY-VRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTE 1547


>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein
            F39B1.1 protein.
          Length = 1607

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +2

Query: 479  RFRGMIQDMHNPEFYFEKFEVFNTTTNEVKVKSGKYRDTAHVSENEKINYSE 634
            ++  ++Q+   P+ Y + + V     N+ K K+   R T H + N+ +NY+E
Sbjct: 1497 KYLALLQNNQQPDPYVKTY-VRPDLRNQSKQKTQVVRGTRHPTFNQDLNYTE 1547


>U40422-5|AAA81448.2|  494|Caenorhabditis elegans Hypothetical
           protein T24D8.1 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 506 ACLGSCL*TALSFRLLNYVKHLN*LVGSG-TNLVISSTCSSLFFHSQSID 360
           +C+       + F + +Y K+L  L G G  +L++ +  S+LF  ++ ID
Sbjct: 311 SCMAFVFGVMIEFTICHYAKNLEMLRGDGQPSLIVDTALSTLFGAARDID 360


>Z78414-2|CAB01668.3|  308|Caenorhabditis elegans Hypothetical
           protein W09D12.2 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 413 LVISSTCSSLFFHSQSIDPASLFRYR 336
           L +S  C  L+FH Q+I   SL  YR
Sbjct: 82  LTVSKLCIGLYFHMQNITGLSLVVYR 107


>AF026206-1|AAK39306.1|  260|Caenorhabditis elegans Hypothetical
           protein T28B4.2 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 21  LSLSYRTVH*ITKLLQYLSNTYMFNIVQLKTLNID 125
           L+L     H  + +++YL+ T  FN+V LKT+  D
Sbjct: 115 LALCSLNPHFQSSMIRYLNGTETFNVVTLKTIGGD 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,387,505
Number of Sequences: 27780
Number of extensions: 258664
Number of successful extensions: 621
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)