Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0863
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.1  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -1

Query: 380 TPSVPGKSPTNSMYCSP*STLVKSANLPGGMALATIG 270
           TP+V       S  CSP S    S   P G  L  +G
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQELG 172


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -1

Query: 380 TPSVPGKSPTNSMYCSP*STLVKSANLPGGMALATIG 270
           TP+V       S  CSP S    S   P G  L  +G
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQELG 172


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -1

Query: 380 TPSVPGKSPTNSMYCSP*STLVKSANLPGGMALATIG 270
           TP+V       S  CSP S    S   P G  L  +G
Sbjct: 136 TPNVTPNCDVKSSVCSPGSGHQDSRTSPSGQHLQELG 172


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 599 CSTTASGFRFGAF 561
           C   A+GF FGAF
Sbjct: 8   CGEPAAGFHFGAF 20


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/40 (22%), Positives = 14/40 (35%)
 Frame = -1

Query: 518  PPWPSTKMCCWVRHTNCLFWNISLFTMATALEPLSRISTT 399
            P W +     W   T   +W  +     T   P +  +TT
Sbjct: 1033 PDWTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTT 1072


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 645 VTRHSVESSL 616
           +TRHS ESSL
Sbjct: 540 ITRHSTESSL 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,703
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)