Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0863
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0151 - 21237677-21237704,21237759-21237829,21238101-212382... 69 3e-12
08_02_1323 - 26136015-26137876,26138300-26139229,26139922-261400... 29 3.3
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 29 3.3
01_01_0137 + 1249081-1249341,1249500-1250237 29 3.3
10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128 29 4.4
10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190 29 4.4
07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408 29 4.4
06_03_0943 - 26191798-26192244,26192802-26192966,26193515-261936... 29 4.4
06_03_1127 - 27807784-27807963,27808362-27808460,27809076-278091... 28 5.9
06_03_0275 - 19079782-19081262,19081803-19082029,19085080-19085099 28 5.9
05_04_0066 + 17621532-17621619,17621658-17621820,17621864-176222... 28 5.9
11_06_0611 + 25461469-25461655,25461670-25462238 28 7.7
03_05_0207 - 21985340-21985570,21986430-21986636,21999578-219996... 28 7.7
>09_06_0151 -
21237677-21237704,21237759-21237829,21238101-21238281,
21238369-21238441,21239033-21239072,21239818-21239890,
21240075-21240151,21241033-21241138,21241256-21241278,
21241369-21241440
Length = 247
Score = 69.3 bits (162), Expect = 3e-12
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Frame = +1
Query: 115 TYDYNAKDLVIYALGVGASVENPTDLKFLY-----ESHENFSPLPSFFILAGMCMEAPIV 279
++ Y+ +D+ +YALGVGA + D K L+ + + LP+F L + +
Sbjct: 26 SFAYDERDVALYALGVGACGADAIDEKELHLVYHRDGQPHIKALPTFASLFPF-KNSNGL 84
Query: 280 ANAMPPGKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYVVDILDKGSSAVAIVNS--E 453
PG D + +LHG+ YIE V + + + DKG + + + +
Sbjct: 85 GIVDVPGLNFDASLLLHGQHYIEIYKPIHSRANV-VNKTKIAGLHDKGKATILEIETTTH 143
Query: 454 IFQNKQLVCRTQQHIFVLGQGGFGGPRNS-------KNAIGVGNAPKRNPDAVVEQRTAE 612
+ + +++C + I++ G GGF P N + + P P AV E +T +
Sbjct: 144 VKDSGEVLCMNRSTIYLRGAGGFSDPSRPYSYASYPTNQVSRISIPNSAPSAVYEDQTQQ 203
Query: 613 DQAA----------LYRMSGDLNPLHID 666
QA LYR+SGD NPLH D
Sbjct: 204 SQACCSFGMLFYALLYRLSGDYNPLHSD 231
>08_02_1323 -
26136015-26137876,26138300-26139229,26139922-26140068,
26140139-26140360,26140513-26140555
Length = 1067
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 19 EKIADVTLEL-VDKLQEFEERSKLDGDKDSYWTTYDYNA 132
E IAD ++E+ V L E SKLD + +Y T Y+ NA
Sbjct: 660 ETIADPSVEIDVANLPSSLELSKLDVETSTYHTAYEANA 698
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -1
Query: 623 AAWSSAVRCSTTASGFRFGAFPTPIAFLLLRGPPKPPWPSTK 498
A+WSSA S +AS R + PTP PP PP P+ K
Sbjct: 6 ASWSSAASSSASASADRLNS-PTPAP-----PPPAPPPPAPK 41
>01_01_0137 + 1249081-1249341,1249500-1250237
Length = 332
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = -1
Query: 356 PTNSMYCSP*STLVKSANLPGGMALATIGASMHIPASMKNEGKGEKFSWLS*RNFKSVGF 177
PTNS ++ V+S++L GG A G + +P + +E GE LS R ++
Sbjct: 258 PTNSDNMVMMTSKVRSSDLSGGFPAAEQGMFLVVPPELLHEVSGET-PILSIRIDRAAPA 316
Query: 176 STEAPTPRA 150
+ TPRA
Sbjct: 317 IAKPTTPRA 325
>10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128
Length = 458
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 421 GSSAVAIVNSEIFQNKQLVCRTQQHIFVLGQGGFG 525
GS + N +IF +L T+ + VLGQGGFG
Sbjct: 111 GSVLQKVENIKIFTKDELKKITKNNSEVLGQGGFG 145
>10_01_0299 - 3101028-3102022,3103004-3103177,3105272-3106190
Length = 695
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 421 GSSAVAIVNSEIFQNKQLVCRTQQHIFVLGQGGFG 525
GS + N +IF +L T+ + VLGQGGFG
Sbjct: 398 GSVLQKVDNVKIFSKDELKKITKNNSEVLGQGGFG 432
>07_01_0983 + 8287866-8287871,8289353-8289583,8289647-8290408
Length = 332
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 421 GSSAVAIVNSEIFQNKQLVCRTQQHIFVLGQGGFG 525
GS + N +IF +L T+ + VLGQGGFG
Sbjct: 13 GSILQKVDNVKIFSKDELKKITKNNSEVLGQGGFG 47
>06_03_0943 -
26191798-26192244,26192802-26192966,26193515-26193668,
26194153-26194346,26194494-26194695,26194899-26195103,
26195672-26195843
Length = 512
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 238 FFILAGMCMEAPIVANAMPPG-KFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYVVDIL 414
++++ G P +A G ++ DFT V HG+ + V GT + Y +
Sbjct: 417 YYVVPGYNKTGPALAQGAATGNRYPDFTRVNHGKYAVSDVRANIGTSNLIWDYFYTTAGV 476
Query: 415 DKGSSAVAIVN 447
G+ + AIV+
Sbjct: 477 SFGTYSPAIVS 487
>06_03_1127 -
27807784-27807963,27808362-27808460,27809076-27809165,
27809272-27809404,27809539-27809624,27810028-27810099,
27810329-27810415,27810485-27810616,27810718-27810789,
27810957-27811037,27811871-27811963,27812298-27812465
Length = 430
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -3
Query: 495 VLLGSAYQLLILEYFTVHNGHGAGALVQDIDNVT--TGCEDSLGAREVTDEFNVLLSVKH 322
+L G + +L Y G G Q ID+V TG SLG +TD + +++
Sbjct: 289 ILAGHTADVSMLAY---EYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPM 345
Query: 321 ISEISEFARRHGVSNDRG 268
+ + EF + H V DRG
Sbjct: 346 LYAMEEFPQLHEVV-DRG 362
>06_03_0275 - 19079782-19081262,19081803-19082029,19085080-19085099
Length = 575
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +1
Query: 49 VDKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKFLYES-----H 213
+ +LQ ++ L + ++ TY Y + YA+ + V +P D++ L+ S H
Sbjct: 426 IPELQLYDYSEPLFRNLIAFEQTYPYTRGHVTAYAVFMDCLVTSPEDMRLLHLSGVLVNH 485
Query: 214 ENFSPLPSFFILAGMCMEAPIVAN 285
N P+ F + +C EA + A+
Sbjct: 486 MNRDRDPTGF-FSRLCSEAHLAAD 508
>05_04_0066 +
17621532-17621619,17621658-17621820,17621864-17622233,
17622548-17623009
Length = 360
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +1
Query: 16 LEKIADVTLELVDKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLK 195
+ ++D+ + L ++ E E++SKL D + + N +V Y V + P+++K
Sbjct: 194 INDVSDILVPLYNE-DELEKKSKLFSDHSLRYL-FLLNNSYVVQYQFLVPSDYSPPSEIK 251
Query: 196 FLYESHE 216
F YE ++
Sbjct: 252 FHYEQYQ 258
>11_06_0611 + 25461469-25461655,25461670-25462238
Length = 251
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 380 SSQPVVTLSISWTRAPAPWPL 442
SSQP T S S ++ P PWPL
Sbjct: 77 SSQPPSTSSSSLSQLPPPWPL 97
>03_05_0207 -
21985340-21985570,21986430-21986636,21999578-21999667,
21999764-21999945,22000130-22001042,22003184-22003266,
22004622-22004939,22005044-22005107
Length = 695
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 121 DYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANA--MP 294
DY++KDL+ +A GVGA+ + +K + + + + LAG +P +A P
Sbjct: 215 DYSSKDLLQHASGVGAASKRKAKVKATHLALARYLKVD----LAGSLESSPQLATVEHQP 270
Query: 295 PG 300
PG
Sbjct: 271 PG 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,586,879
Number of Sequences: 37544
Number of extensions: 498272
Number of successful extensions: 1654
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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