Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0863
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta... 29 3.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.9
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 29 3.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.9
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 5.2
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 5.2
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 28 5.2
AC024761-8|AAF59469.2| 335|Caenorhabditis elegans Hypothetical ... 28 5.2
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 27 9.1
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 27 9.1
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 27 9.1
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 27 9.1
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 27 9.1
U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical... 27 9.1
>U28943-4|AAA68358.1| 298|Caenorhabditis elegans Hypothetical
protein E04F6.3 protein.
Length = 298
Score = 146 bits (353), Expect = 2e-35
Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 2/185 (1%)
Frame = +1
Query: 118 YDYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPP 297
+ Y+ +D +IYALGVGA + DL ++YE+HE+F LPS+ + G +A + + P
Sbjct: 16 FSYSTRDAIIYALGVGARAKE--DLCYVYENHEDFKVLPSYIVAPGF--QAHTLMDW--P 69
Query: 298 GKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYVVDILDKGSSAVAIVNSEIF-QNKQL 474
G D VLHGEQYIE EG + VVDILDKGS A+ + N + +N +
Sbjct: 70 GVEFDLQRVLHGEQYIEVYQPL-SAEGKLKSEARVVDILDKGSGALILGNVTTYDENGKK 128
Query: 475 VCRTQQHIFVLGQGGFGGPRNSKNAIGVGNAPKRNPDAVVEQRTAEDQAALYRM-SGDLN 651
+ Q F G G FGG R S + I P R PDAV+EQ+T DQAALYR+ SGD+N
Sbjct: 129 IAMQQFSTFQTGSGNFGGDRTSPHEIKAATVPDRAPDAVIEQKTTVDQAALYRLGSGDMN 188
Query: 652 PLHID 666
PLH+D
Sbjct: 189 PLHVD 193
>AC006624-8|AAF39782.2| 1092|Caenorhabditis elegans Importin beta
family protein 3 protein.
Length = 1092
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 375 LGAREVTDEFNVLLSVKHISEISEFARRHGVSNDRGLHAHSSQYEERG*GREILVALVKE 196
L A +FN+ + + + E E HG+ ++ + +S EE+ ++LVA KE
Sbjct: 623 LRAARYRPDFNIFNN-EDVHENEEGVEYHGIGGEKTVGIRTSGLEEKATACDMLVAFAKE 681
Query: 195 LQ 190
++
Sbjct: 682 MK 683
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Frame = +1
Query: 10 KHLEKIADVTLELVDKLQ---EFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVEN 180
+ +E +A L+ V K+ E K DGD D W YD + + L ++ + V
Sbjct: 6078 RSVEDLASEALQNVTKISFGHADESDDKHDGDNDGEWKVYDRHGEVLEEFSTQLTDDVIQ 6137
Query: 181 PTD---LKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADF---TNVLHGEQ 339
+ + + +SP S F+ C E ++N ++D N+L GE+
Sbjct: 6138 EAEGDATTHIMMTQAEYSPRRSKFLKQESCQE---ISNEPEVDYYSDLQEKLNILAGEK 6193
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 505 LGQGGFGGPRNSKNAIGVGNAPKRNPDAVVEQRTAED 615
+G+GGFGG G+G + PD++ E D
Sbjct: 198 MGRGGFGGQGMGGMGAGLGQGRRGGPDSMNESSDVND 234
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Frame = +1
Query: 10 KHLEKIADVTLELVDKLQ---EFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVEN 180
+ +E +A L+ V K+ E K DGD D W YD + + L ++ + V
Sbjct: 6078 RSVEDLASEALQNVTKISFGHADESDDKHDGDNDGEWKVYDRHGEVLEEFSTQLTDDVIQ 6137
Query: 181 PTD---LKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADF---TNVLHGEQ 339
+ + + +SP S F+ C E ++N ++D N+L GE+
Sbjct: 6138 EAEGDATTHIMMTQAEYSPRRSKFLKQESCQE---ISNEPEVDYYSDLQEKLNILAGEK 6193
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 270 GLHAHSSQYEERG*GREILVALVKELQIGRVLDRSSHSQ 154
GLH S +E ++ LV +LQI VLD S S+
Sbjct: 1721 GLHLMSHTAARNSMAKEYVIPLVPQLQIKNVLDPDSESR 1759
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 270 GLHAHSSQYEERG*GREILVALVKELQIGRVLDRSSHSQ 154
GLH S +E ++ LV +LQI VLD S S+
Sbjct: 1842 GLHLMSHTAARNSMAKEYVIPLVPQLQIKNVLDPDSESR 1880
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 508 GQGGFGGPRNSKNAI-GVGNAPKRNPDAVVEQRTAEDQA 621
G+GG G PR SKN+ G G P + + +ED+A
Sbjct: 72 GRGGRGRPRGSKNSDGGAGGPPAKRGRKKKAKSESEDEA 110
>AC024761-8|AAF59469.2| 335|Caenorhabditis elegans Hypothetical
protein Y38C1AA.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 147 LRPGSGSFGREPDRFEVPLREPREFLSLTLVLHT-GWNVH 263
L+ G G G+EP PL E + S LV++T W+ H
Sbjct: 109 LKIGDGDAGQEPSSAITPLNELLQLSSWDLVVYTKDWHPH 148
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 181 PTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADFTNVLHGE 336
P D K+LY S +N P + + +PI+ +A P G N+L E
Sbjct: 439 PEDRKWLYPSTQNLYPTST----SNPSSPSPIMGSAPPTGSILPSANLLSAE 486
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 181 PTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADFTNVLHGE 336
P D K+LY S +N P + + +PI+ +A P G N+L E
Sbjct: 439 PEDRKWLYPSTQNLYPTST----SNPSSPSPIMGSAPPTGSILPSANLLSAE 486
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Frame = +1
Query: 43 ELVDKLQEFE-ERSKLDGDKDSYWTTYDYN-------AKDLVIYALGV---GASVENPTD 189
E V KL+ E E SK+ +S W + + DL + ALGV G V+ P +
Sbjct: 826 ETVQKLRRRESEMSKVSNVSESDWDSETGKEPEVAEISLDLSVVALGVDESGKVVDIPKE 885
Query: 190 LKFLYESHENFSP 228
+ + HE+FSP
Sbjct: 886 VPKAVQRHESFSP 898
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Frame = +1
Query: 43 ELVDKLQEFE-ERSKLDGDKDSYWTTYDYN-------AKDLVIYALGV---GASVENPTD 189
E V KL+ E E SK+ +S W + + DL + ALGV G V+ P +
Sbjct: 826 ETVQKLRRRESEMSKVSNVSESDWDSETGKEPEVAEISLDLSVVALGVDESGKVVDIPKE 885
Query: 190 LKFLYESHENFSP 228
+ + HE+FSP
Sbjct: 886 VPKAVQRHESFSP 898
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Frame = +1
Query: 43 ELVDKLQEFE-ERSKLDGDKDSYWTTYDYN-------AKDLVIYALGV---GASVENPTD 189
E V KL+ E E SK+ +S W + + DL + ALGV G V+ P +
Sbjct: 826 ETVQKLRRRESEMSKVSNVSESDWDSETGKEPEVAEISLDLSVVALGVDESGKVVDIPKE 885
Query: 190 LKFLYESHENFSP 228
+ + HE+FSP
Sbjct: 886 VPKAVQRHESFSP 898
>U41014-1|AAK32947.3| 641|Caenorhabditis elegans Hypothetical
protein C06G1.4 protein.
Length = 641
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 508 GQGGFGGPRNSKNAIGVGNA 567
GQGG GG RN N G+G++
Sbjct: 289 GQGGHGGQRNYNNRGGMGHS 308
>AL132948-37|CAD31830.2| 410|Caenorhabditis elegans Hypothetical
protein Y39B6A.38 protein.
Length = 410
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 22 KIADVTLELVDKLQEFEERSK 84
++A V ++L ++QEFEERSK
Sbjct: 382 RLAQVRIQLEIRIQEFEERSK 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,503,010
Number of Sequences: 27780
Number of extensions: 379490
Number of successful extensions: 1282
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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