Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0863
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76150.1 68414.m08843 maoC-like dehydratase domain-containing... 98 5e-21
At1g65610.1 68414.m07442 endo-1,4-beta-glucanase, putative / cel... 31 0.52
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 31 0.69
At1g49920.1 68414.m05598 zinc finger protein-related weak simila... 30 1.2
At5g01450.1 68418.m00058 expressed protein 29 2.1
At4g09790.1 68417.m01608 F-box family protein hypothetical prote... 29 3.7
At1g32500.1 68414.m04010 ATP-binding-cassette transporter, putat... 29 3.7
At5g11070.1 68418.m01293 expressed protein 28 4.9
At1g63530.1 68414.m07182 hypothetical protein 28 6.5
At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger) fa... 27 8.5
At4g08810.1 68417.m01450 expressed protein 27 8.5
At4g03380.1 68417.m00460 expressed protein 27 8.5
At3g16680.1 68416.m02131 expressed protein ; expression supporte... 27 8.5
At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containi... 27 8.5
At1g16110.1 68414.m01931 wall-associated kinase, putative contai... 27 8.5
>At1g76150.1 68414.m08843 maoC-like dehydratase domain-containing
protein contains similarity to Swiss-Prot:P51659
estradiol 17 beta-dehydrogenase 4 (17-beta-HSD 4)
(17-beta-hydroxysteroid dehydrogenase 4) [Homo sapiens];
contains Pfam profile PF01575: MaoC like domain
Length = 309
Score = 97.9 bits (233), Expect = 5e-21
Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 14/199 (7%)
Frame = +1
Query: 112 TTYDYNAKDLVIYALGVGASVENPTD---LKFLYESH--ENFSPLPSFFILAGMCMEAPI 276
T Y YN +D+ IYALG+GA ++ D LKF+Y + + LP+F A + +
Sbjct: 21 TRYTYNERDVAIYALGIGACGQDAVDSDELKFVYHRNGQDLIQVLPTF---ASLFTLGSL 77
Query: 277 VANAMPPGKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYVVDILDKGSSAVAIVNSEI 456
PG D + +LHG+QYIE P + + + + DKG +A+ + +
Sbjct: 78 TEGLDLPGFKYDPSLLLHGQQYIEIYRPLPSKASLIN-KVSLAGLQDKGKAAILELETRS 136
Query: 457 FQ--NKQLVCRTQQHIFVLGQGGFGG---PRNSKN-AIGVGNA---PKRNPDAVVEQRTA 609
++ + +L+C + +F+ G GGF P + KN G A P+R P V E+RT
Sbjct: 137 YEEGSGELLCMNRTTVFLRGAGGFSNSSQPFSYKNYPSNQGLAVKIPQRQPLTVCEERTQ 196
Query: 610 EDQAALYRMSGDLNPLHID 666
QA LYR+SGD NPLH D
Sbjct: 197 PSQALLYRLSGDYNPLHSD 215
>At1g65610.1 68414.m07442 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-1,4-beta-glucanase
GI:2065530 from [Lycopersicon esculentum]
Length = 623
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 515 EVSVDPAIARTLSASETHRSEILMPSWNNAPPKTRLLST 631
+ + P++ +T A +R E+++PSWNN P LL T
Sbjct: 354 QFATTPSVPQTAKAF-ANRPELMVPSWNNKLPGAMLLMT 391
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = -3
Query: 375 LGAREVTDEFNVLLS--VKHISEISEFARRHGVSNDRGLHAHSSQYEERG*GREILVALV 202
LG+ + T+E + S ++ I F R G+ D G H H S Y +R + LV +V
Sbjct: 202 LGSVDCTEEPTLCKSNHIQGYPSIRIFRRGSGLREDHGNHEHESYYGDR--DTDSLVKMV 259
Query: 201 KELQIGRVLDRSSHSQGVD 145
+EL + + + H +D
Sbjct: 260 EELL--KPIKKEDHKLALD 276
>At1g49920.1 68414.m05598 zinc finger protein-related weak
similarity to mudrA [Zea mays] GI:540581, MURAZC [Zea
mays] GI:1857256; contains Pfam profiles PF03108: MuDR
family transposase, PF04434: SWIM zinc finger
Length = 785
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 457 IFHCSQWPRRWSPCPGYRQRNNGL*RLPRCQGSH 356
+ C +W +WS C R+ +GL + C G H
Sbjct: 218 VVECERWHCKWSICAS-RREEDGLFEITECSGPH 250
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -1
Query: 488 WVRHTNCLFWNISLFTMATAL----EPLSRISTT*QRVVKTPSVPGKSPTNSMYCSP*ST 321
W+ + C+ +L + ++L +P++ T + P +PGK NS +CS S+
Sbjct: 311 WIAYIVCMGVVTALLLIVSSLFNKRQPVTEDETVDENDDVAPLIPGKDDDNSSWCSSYSS 370
Query: 320 LVKS 309
++ S
Sbjct: 371 ILTS 374
>At4g09790.1 68417.m01608 F-box family protein hypothetical protein
-Arabidopsis thaliana;PID:g2245079; contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
protein interaction domain
Length = 351
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 88 DGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKFLYESHE 216
DG++D Y Y L +YALG +++N L+F+ +S+E
Sbjct: 73 DGNEDELADPYIYEGYRLDVYALGYDKNLKNHKILRFV-DSYE 114
>At1g32500.1 68414.m04010 ATP-binding-cassette transporter, putative
similar to ATP-binding-cassette transporter (ABC1)
described in PMID:11156608
Length = 475
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 43 ELVDKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKF 198
EL +++ EF D D +W+ A DL++ + G VENP L++
Sbjct: 160 ELTNRISEFI--GNFDSG-DLFWSINGMGAPDLMVIYVPEGCKVENPIYLRY 208
>At5g11070.1 68418.m01293 expressed protein
Length = 152
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 233 PRSSY-WLECAWRPRSLLTPCRRANSLISLMCFTESSTLNSSV 358
PRS Y WL+ + L CRR S I + C + N+ V
Sbjct: 49 PRSPYEWLKSTAQELELRDRCRRVKSRIKVTCRNNNCAYNNCV 91
>At1g63530.1 68414.m07182 hypothetical protein
Length = 499
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -1
Query: 596 STTASGFRFGAFPTPIAFLLLRGPPKPPWPSTKMCCWVRHTNCLFWNISLFTMA 435
+TT+ G + PTPI+FL P PP PS+ + ++ W+IS ++ A
Sbjct: 80 ATTSVGVSSTSTPTPISFLPFGYVPPPP-PSSSLSGPAQNVP---WSISAYSTA 129
>At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 508
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 254 ECAWRPRSLLTPCR 295
EC WR LTPCR
Sbjct: 305 ECGWRENDCLTPCR 318
>At4g08810.1 68417.m01450 expressed protein
Length = 552
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/71 (29%), Positives = 28/71 (39%)
Frame = +2
Query: 212 TRISLPYPRSSYWLECAWRPRSLLTPCRRANSLISLMCFTESSTLNSSVTSLAPRESSQP 391
T I++ Y WLE A LLT A I L SS +S P S++
Sbjct: 35 TVIAVTYQPPDPWLESAPALTKLLTETENATFKIDGSILKTGEDLASSPSSSPPSNSTEQ 94
Query: 392 VVTLSISWTRA 424
V +I + A
Sbjct: 95 VTEATIEKSEA 105
>At4g03380.1 68417.m00460 expressed protein
Length = 200
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 482 EPSSTFSC*AKEVSVDPAIARTLSASETHRSEILMPSWNNAPPKT 616
+P S+FS AKE + A+ ++ HRSE + P+ P +T
Sbjct: 146 KPYSSFSRNAKEDDRNDGEAQGTMTNDVHRSEAIQPTLLPGPNQT 190
>At3g16680.1 68416.m02131 expressed protein ; expression supported
by MPSS
Length = 87
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 439 IVNSEIFQNKQLVCRTQQHIFV 504
I + E+FQ K+L+ ++H+FV
Sbjct: 40 IFHIEVFQEKELIVNVKEHVFV 61
>At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 778
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 433 VAIVNSEIFQNKQLVCRTQQHIFVLGQGGFGGPRNSKNAIGVGNAPKRNPDAVVEQRTAE 612
+ V I VC T H V GFG R ++ + +R+ V+ + AE
Sbjct: 290 IVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAE 349
Query: 613 D 615
D
Sbjct: 350 D 350
>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
similarity to wall-associated kinase 2 GI:4826399 from
[Arabidopsis thaliana]
Length = 642
Score = 27.5 bits (58), Expect = 8.5
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = -3
Query: 648 EVTRHSVESSLVFGGALFHDGIRISLRCVSDADSVLAIAGSTETSLA*HENVLLGSAYQL 469
EV S+ G + G SL C S + S + +E SL GS Y
Sbjct: 92 EVVNISLPDGKKLYGVVHIKGPVTSLGCSSSSSS----SQVSEMSLPNLNVTGRGSPY-F 146
Query: 468 LILEYFTVHNGHGAGALVQDIDNVTTG----CEDSLGAREVTD 352
L E V G G AL++DI++ G CEDS + EVT+
Sbjct: 147 LTDENCLVMVGCGTKALMKDIESEILGCESSCEDSKSSEEVTN 189
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,739,232
Number of Sequences: 28952
Number of extensions: 360323
Number of successful extensions: 1283
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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