Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0862
(593 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 179 2e-46
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 33 0.042
SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4 |Sc... 30 0.29
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 29 0.51
SPAC2G11.03c |vps45||vacuolar sorting protein Vps 45|Schizosacch... 29 0.51
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c... 27 2.7
SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomy... 26 4.8
SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr 2||... 26 4.8
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 25 6.3
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 25 6.3
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 6.3
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 25 6.3
SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces pombe... 25 6.3
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 25 6.3
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 25 6.3
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy... 25 8.3
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 25 8.3
SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein... 25 8.3
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 179 bits (436), Expect = 2e-46
Identities = 90/177 (50%), Positives = 112/177 (63%), Gaps = 14/177 (7%)
Frame = +1
Query: 103 FTNIAKQYEHEFWLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNGSVYF 282
F +A +E +F DMA+LNV P +TRVSE++ I FVQR+ID AY +GSVYF
Sbjct: 218 FRKLAAYWEDDFNKDMANLNVLPPTAVTRVSEYVPEIVDFVQRIIDRGYAYPVTDGSVYF 277
Query: 283 DTDKFSN----YGKLQ-------KMQDSGEPSDDE---KRNKMDFALWKSHKPEEPYWDT 420
DT+ F Y KL+ ++ GE S K+ DFALWK+ KP EP WD+
Sbjct: 278 DTEAFEKGGHFYAKLEPWNKGNRELIAEGEGSLAALTGKKRPGDFALWKASKPGEPSWDS 337
Query: 421 PWGKGRPGWHIECSAMVSKVFGSQLDIHAGGVDLQFPHHENEEAQSCAYHNIRQWAN 591
PW KGRPGWHIECS M S + GS +DIH+GG+DL FPHH+NE AQS AY + QW N
Sbjct: 338 PWSKGRPGWHIECSVMASALLGSNIDIHSGGIDLAFPHHDNELAQSEAYFDCPQWVN 394
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 32.7 bits (71), Expect = 0.042
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 575 ILWYAHDCASSFS**GNCRSTPPAWMSNCDPNT 477
++WY H C++ F GNC ++ +PNT
Sbjct: 6 VIWYCHSCSNEFQRPGNCPRCNSDFVEMVEPNT 38
>SPCC330.05c |ura4||orotidine 5'-phosphate decarboxylase Ura4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 29.9 bits (64), Expect = 0.29
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 190 VSEHINSIEKFVQRLIDNDMAYVSKNGSVYFDTDKFSNYGKLQKMQ 327
+ HI+ +E F Q +++ +A K+ + F+ KF++ G K+Q
Sbjct: 61 IKTHIDVVEDFDQDMVEKLVALGKKHRFLIFEDRKFADIGNTVKLQ 106
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 29.1 bits (62), Expect = 0.51
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 310 KLQKMQDSGEPSDDEKRNKMDFALWKSHKPEEPY 411
+LQKMQD+ + D+ +R K++ L K + EE +
Sbjct: 296 RLQKMQDNAKELDESRRKKIEL-LEKKERDEEQF 328
>SPAC2G11.03c |vps45||vacuolar sorting protein Vps
45|Schizosaccharomyces pombe|chr 1|||Manual
Length = 558
Score = 29.1 bits (62), Expect = 0.51
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = -2
Query: 487 IQILC*PLQNILYASQVCLY----PRGYPNRVPRACDFSKEQSPFYFFFHHLMVHHCLAF 320
+++LC L++ YA + P+ + R+ + DF +S FF +L+V++ LA
Sbjct: 77 LRLLCEELRDPKYAEYHLYFTNVIPKSFLERLAESDDFEAVKSIQEFFLDYLVVNNDLAS 136
Query: 319 FVICH 305
F I H
Sbjct: 137 FNIPH 141
>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1
Query: 275 TEPFLLT*AMSLSISLCTNFSILL 204
T P L+T MSLSI L F ILL
Sbjct: 287 TSPLLVTVGMSLSIPLALFFDILL 310
>SPBC660.14 |mik1||mitotic inhibitor kinase Mik1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 317 KKCKTVVNHQMMKKEIKWTLLFGKVTSPRN 406
K+ T ++ ++ K KW+L G +T+PR+
Sbjct: 125 KRAVTSLSTGLLSKREKWSLWEGNLTNPRS 154
>SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 525
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = -3
Query: 240 INKPLYEFLNTINVFRYPRYDEWLCYIQ*CHIKPEFMLILFSNICE-VCFT------FEA 82
I+K + + N+ N+F P ++ L ++ +L L S IC+ + F+ F
Sbjct: 296 IDKKIAKLQNSTNIFYVPEHEPILAFVHQLSSSYTNLLNLRSAICDWLKFSRYHYLKFFT 355
Query: 81 FLNDFVVYIRNTHSGD 34
F+ + V+ ++T S D
Sbjct: 356 FVEAYSVFCKDTKSAD 371
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 6.3
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +1
Query: 163 VAKPLIITRVSEH-INSIEKFVQR---LIDNDMAYVSKNGSVYFDTDKFSNY 306
+A +I ++S+H +IE+FV + DN ++ + VY D D NY
Sbjct: 257 MALEVIQKKLSKHRYETIEQFVDDFNLMFDNAKSFNDPSSQVYRDADFLKNY 308
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 421 GYPNRVPRACDFSKEQ 374
G P R+PRACD +++
Sbjct: 2 GKPKRIPRACDMCRKR 17
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 433 LYPRG-YPNRVPRACDFSKEQSPFY 362
L PRG YP+ ++CDF + FY
Sbjct: 131 LSPRGNYPSEAEKSCDFYGQPLHFY 155
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 338 SPLSCIFCNLP*FENLSVSKYTEPFLLT*AMSLSISLCTN 219
SPL + NL F+ +++S+Y P + + SL +N
Sbjct: 71 SPLLAKWANLKAFQRVNISQYVHPLKEAEGIKIVASLSSN 110
>SPBC36.05c |clr6||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 405
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 255 ISHVVINKPLYEFLNTINVFRYPRYDEWLCY 163
+ ++V+N LYE LN I R R D C+
Sbjct: 35 VHNLVVNYNLYEKLNVITPVRATRNDMTRCH 65
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.4 bits (53), Expect = 6.3
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 235 IDNDMAYVSKNGSVYFDTDKFSNYGKLQK--MQDSGEPSDDEKRNKMDFALWKSHKP 399
+ + ++V K S Y D ++ ++ D E S + +N +DF + +H P
Sbjct: 577 VSDAKSFVKKIKSTYIDDSSSNSPSDIESNYSADDNEISKSKAQNAIDFNVTNTHSP 633
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 139 WLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDM 249
W D+ VA+ + I EH+N+ +F + L + ++
Sbjct: 9 WTDVKDKPVARVVFIHGFGEHVNAYPEFFEALNERNI 45
>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 427
Score = 25.0 bits (52), Expect = 8.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = +2
Query: 278 ILIPINSQTMANYKKCKTV------VNHQMMKKEIKWTLLFGKVTSPRNPIGIPPGVKAD 439
I P S+ + +KK TV V++ + +KE FG+ TS NP+ P K D
Sbjct: 332 IRFPDGSRAVRRFKKDDTVESVYNYVDYMLFEKEEPEE--FGRATSSSNPVTPPSDYKHD 389
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 110 FVKCVLLSRPFLMILSSISV-IPIAETIFILKN 15
F+ +L + ++ ++S+ +PIAE + +LKN
Sbjct: 750 FLSTLLQHKTIILFTHNVSLCLPIAENVIVLKN 782
>SPCC1795.01c |mad3|SPCC895.02|mitotic spindle checkpoint protein
Mad3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 8.3
Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 8/128 (6%)
Frame = +1
Query: 118 KQYEHEFWLDMA------SLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNGSVY 279
+Q+ H WL+ A + N PL T S +I I + ++ + SVY
Sbjct: 192 QQFTHR-WLEFAPQSFSSNTNSVNPLQTTFESTNIQEISQSRTKISKPKFKF-----SVY 245
Query: 280 FDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFALWKSHK-P-EEPYWDTPWGKGRPGWHI 453
D D G+ Q G K N + W K P + P P GK + +
Sbjct: 246 SDADGSGKDGQPGTWQTLGTVDQRRKENNISATSWVGEKLPLKSPRKLDPLGK----FQV 301
Query: 454 ECSAMVSK 477
C VSK
Sbjct: 302 HCDEEVSK 309
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,669,594
Number of Sequences: 5004
Number of extensions: 59954
Number of successful extensions: 193
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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