Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0862
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0243 - 21813223-21813456,21814266-21814367,21814501-218147... 167 8e-42
03_01_0304 - 2378657-2378704,2378790-2378795,2378860-2379039,237... 155 3e-38
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 147 5e-36
08_02_0073 + 11919938-11920060,11922325-11922939 31 0.69
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331 31 0.92
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148... 30 1.2
02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916 30 1.6
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 29 2.8
04_03_1037 - 21901989-21902468,21903308-21903526,21903984-219041... 29 3.7
04_01_0556 - 7156851-7157096,7157288-7157530,7158112-7158153,715... 28 4.9
12_02_1106 - 26134960-26135115,26135901-26136207,26136421-26137004 27 8.5
11_06_0207 + 21214631-21216121 27 8.5
11_04_0443 - 17808897-17809110,17809169-17813652 27 8.5
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421... 27 8.5
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 27 8.5
01_05_0334 - 21068575-21068642,21068723-21068813,21068955-210690... 27 8.5
>09_06_0243 -
21813223-21813456,21814266-21814367,21814501-21814701,
21815591-21815716,21815791-21816072,21816218-21816388,
21816838-21816999,21817404-21817467,21818136-21818503
Length = 569
Score = 167 bits (405), Expect = 8e-42
Identities = 82/168 (48%), Positives = 106/168 (63%), Gaps = 9/168 (5%)
Frame = +1
Query: 109 NIAKQYEHEFWLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNGSVYFDT 288
+++K+Y +F DMA+L+ P + RVS+HI+ I ++++IDND AY G VYF
Sbjct: 158 SLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAI-GGDVYFSV 216
Query: 289 DKFSNYGKL--QKMQDS--GE--PSDDEKRNKMDFALWKSHKPEEPYWDTPWGKGRPGWH 450
+ F YG L +K+ D+ GE D+ K+N DFALWK+ K EP WD+PWG GRPGWH
Sbjct: 217 ENFPEYGDLSGRKLDDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWH 276
Query: 451 IECSAMVSKVFGSQLDIHAGGVDLQFPHHENEEAQS---CAYHNIRQW 585
IECSAM + G DIH GG DL FPHHENE AQS C +I W
Sbjct: 277 IECSAMSAHYLGHSFDIHGGGEDLIFPHHENEIAQSRAACCDSSINYW 324
>03_01_0304 -
2378657-2378704,2378790-2378795,2378860-2379039,
2379145-2379327,2379549-2379632,2379748-2379873,
2379964-2380245,2380326-2380496,2380828-2380989,
2381501-2381564,2382040-2382221
Length = 495
Score = 155 bits (375), Expect = 3e-38
Identities = 75/159 (47%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Frame = +1
Query: 106 TNIAKQYEHEFWLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNGSVYFD 285
T+++ ++ +EF LDMA L P RV++HI I + + ++++N AY + G VYF
Sbjct: 95 TSLSSRFINEFLLDMAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAME-GDVYFS 153
Query: 286 TDKFSNYGKLQ------KMQDSGEPSDDEKRNKMDFALWKSHKPEEPYWDTPWGKGRPGW 447
D F Y L + S D KRN DFALWK+ K EP+WD+PWG+GRPGW
Sbjct: 154 VDTFPEYLSLSGRKLDHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGW 213
Query: 448 HIECSAMVSKVFGSQLDIHAGGVDLQFPHHENEEAQSCA 564
HIECSAM + G DIH GG DL FPHHENE AQS A
Sbjct: 214 HIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSRA 252
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 147 bits (357), Expect = 5e-36
Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Frame = +1
Query: 109 NIAKQYEHEFWLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNGSVYFDT 288
+++ ++ EF DM L P RV++HI I + +++DN AY + G VYF
Sbjct: 107 SLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGKAYTIE-GDVYFSV 165
Query: 289 DKFSNYGKLQ-KMQDSGEPS-----DDEKRNKMDFALWKSHKPEEPYWDTPWGKGRPGWH 450
D F +Y L + D P D KRN DFALWKS K EP W++PWG+GRPGWH
Sbjct: 166 DNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSWESPWGRGRPGWH 225
Query: 451 IECSAMVSKVFGSQLDIHAGGVDLQFPHHENEEAQSCA 564
IECSAM + G+ DIH GG DL FPHHENE AQS A
Sbjct: 226 IECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQA 263
>08_02_0073 + 11919938-11920060,11922325-11922939
Length = 245
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 202 INSIEKFVQRLIDNDMAYVSKNGSVYFDTDKFSNYGKL 315
+N++ V+ ++D MA G VYF F NY L
Sbjct: 204 VNTLSNMVKTMVDGSMAEYQATGPVYFPGGVFPNYQPL 241
>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
Length = 599
Score = 30.7 bits (66), Expect = 0.92
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 433 GRPGWHIECSAMVSKVFGSQLDIHAGGVDLQFPH 534
G P E SA +SKV G ++D GG + PH
Sbjct: 9 GEPVEVTEASARISKVIGDKIDAGRGGEAIPLPH 42
>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
35714942-35715135,35715237-35716786,35716946-35717049,
35717258-35717399,35717692-35717910
Length = 1535
Score = 30.3 bits (65), Expect = 1.2
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = +1
Query: 91 SKTHFTNIAKQYEHEFWLDMASLNVAKPLIITRVSEHINSIEKFVQRLIDNDMAYVSKNG 270
SK HFTN+ Q + + L V + L R+ + I SIE + L D ++A + +
Sbjct: 1026 SKDHFTNLGSQDIPDASISDI-LQVEEKLSSDRLHDGIFSIEGTLISLDDGNIADSNNSS 1084
Query: 271 SVYFDTDKFSNYGKLQ----KMQDSGEPSDDEKRNKMDFA 378
V+ +T N LQ K+QD RNK+D A
Sbjct: 1085 FVFHNTQINRNLLGLQKGSFKLQDE-HTMTPISRNKVDIA 1123
>02_03_0035 + 14173497-14173519,14173646-14173853,14173979-14175916
Length = 722
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 217 KFVQRLIDNDMAYVSKNGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFA 378
K + LI ND K+G V + + N L K +D GEP D D A
Sbjct: 625 KDLYSLIGNDEGNTEKDGPVLLVSKMWENSYNLSKERDDGEPEVDLLDTDRDIA 678
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 292 KFSNYGKLQKMQDSGEPSDDEKRNKMDFALWKSHKPEEPYWDTPWGKGRPGWHIECSAMV 471
K SN G+ Q SG +K N+ D K H+ P+ G+ PGW + A++
Sbjct: 598 KSSNDGEKGASQPSGSQGLYDKLNEFD--PMKQHRTFCPWICPDGGETLPGWRLTLPALL 655
Query: 472 SK 477
S+
Sbjct: 656 SQ 657
>04_03_1037 -
21901989-21902468,21903308-21903526,21903984-21904106,
21904225-21904392
Length = 329
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +1
Query: 181 ITRVSEHINSI-EKFVQRLIDNDMAYV-------SKNGSVYFDTDKFSNYGKLQKMQDSG 336
+ R S++I ++ EK QR + D+ Y SK +Y D DKF +K+++
Sbjct: 94 VVRESKYIAALKEKAEQRKREQDIIYERKLQKERSKEDHLYGDKDKFVTSAYRKKLEEER 153
Query: 337 EPSDDEKRNKM 369
+ ++EKR ++
Sbjct: 154 KWLEEEKRRQL 164
>04_01_0556 -
7156851-7157096,7157288-7157530,7158112-7158153,
7158324-7158425,7159209-7159342,7161071-7161131,
7161192-7161284,7161557-7161639,7161984-7162239
Length = 419
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 265 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFA 378
+ + YF+ + + GK +K SG S +KR K D+A
Sbjct: 70 DNNTYFEYLRHISLGKCKKNSTSGSKSPKKKRQKGDYA 107
>12_02_1106 - 26134960-26135115,26135901-26136207,26136421-26137004
Length = 348
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 403 PRACDFSKEQSPFYFFFHHLMVHHCLAFFVI 311
P+ D SK +P F F LM C A++V+
Sbjct: 300 PKVEDVSKPVNPITFLFRFLMGTICAAYYVL 330
>11_06_0207 + 21214631-21216121
Length = 496
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +1
Query: 346 DDEKRNKMDFALWKSHKPEEPYWDTPWGKGRPGWHIECSAMVSKVFGSQLDIHAGGV 516
++ +R K +W S P W TP GW + C + G +L GG+
Sbjct: 436 ENRRRKKTISPIWSSWP--SPVWITPSIAKADGWCVPCGVGTPVMGGRELARREGGL 490
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 454 ECSAMVSKVFGSQLDIHAGGVDLQFPHHENEEAQSCAYHNIRQ 582
E S K + + +IHA L EN+E + C Y+ RQ
Sbjct: 130 EISMESEKNYQVRKNIHAESYTLHLSAQENKEQEECGYYMWRQ 172
>07_01_0567 -
4214196-4214351,4214539-4214845,4215005-4215069,
4215406-4215471,4215594-4215639,4215671-4216200
Length = 389
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 403 PRACDFSKEQSPFYFFFHHLMVHHCLAFFVI 311
P+A D K +PF F F +M C +++V+
Sbjct: 341 PKAEDVEKPVNPFTFIFRFVMGTICASYYVL 371
>03_02_1012 +
13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 298 SNYGKLQKMQDSGEPSDD---EKRNKMDFALWKSHKPEEPYWDTP 423
S G+L++ DSG P+DD + NK+D L S PE+ TP
Sbjct: 519 SETGRLRQSSDSGIPTDDLASMEPNKIDL-LHPSTMPEKSSVQTP 562
>01_05_0334 -
21068575-21068642,21068723-21068813,21068955-21069071,
21069166-21069219,21069334-21070004,21070445-21070473,
21070576-21070643,21072382-21072621
Length = 445
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 119 LAIFVKCVLLSRPFLMILSSISVIPIAETIFILKNDLSL 3
LAI +C + ++ LS + +IP+AE + L ++L
Sbjct: 69 LAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIAL 107
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,644
Number of Sequences: 37544
Number of extensions: 357112
Number of successful extensions: 951
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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