Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0862
(593 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.42
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.42
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 2.3
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.3
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 3.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 6.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.1
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 367 FYFFFHH----LMVHHCLAFFVICHSLRIYRYQNILNRFYLHK 251
FYF +H M+ + L F I + ++ +LNR+YL +
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLER 273
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/35 (22%), Positives = 20/35 (57%)
Frame = -2
Query: 454 LYASQVCLYPRGYPNRVPRACDFSKEQSPFYFFFH 350
L+ + +CL + PN+V +++++ + F+H
Sbjct: 10 LFLASLCLLVQAVPNKVADKTYVTRQKNIYELFWH 44
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 367 FYFFFHH----LMVHHCLAFFVICHSLRIYRYQNILNRFYLHK 251
FYF +H M+ + L F I + ++ +LNR+YL +
Sbjct: 231 FYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLHKQVLNRYYLER 273
Score = 23.4 bits (48), Expect = 1.7
Identities = 8/35 (22%), Positives = 20/35 (57%)
Frame = -2
Query: 454 LYASQVCLYPRGYPNRVPRACDFSKEQSPFYFFFH 350
L+ + +CL + PN+V +++++ + F+H
Sbjct: 10 LFLASLCLLVQAVPNKVADKTYVTRQKNIYELFWH 44
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 223 VQRLIDNDMAYVSKNGSVYFDTDKFS 300
V + I + Y +KNGSV DT + S
Sbjct: 187 VPQAIQFGVVYENKNGSVILDTARCS 212
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 265 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFALWKSHKPEE 405
+G V+F D S YG ++ G P + K++ + L +P +
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQSFLKNQLQALFQPTD 52
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = -1
Query: 212 ILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 114
+LL+ ++ +++ + FND +S++ CL+
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 265 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFALWKSHKPEE 405
+G V+F D S YG ++ G P + K++ + L +P +
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQSFLKNQLQALFQPTD 52
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = -1
Query: 212 ILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 114
+LL+ ++ +++ + FND +S++ CL+
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 265 NGSVYFDTDKFSNYGKLQKMQDSGEPSDDEKRNKMDFALWKSHKPEE 405
+G V+F D S YG ++ G P + K++ + L +P +
Sbjct: 6 SGKVHFGVDDVSLYGTPKEEPGPGLPGQEVKQSFLKNQLQALFQPTD 52
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = -1
Query: 212 ILLMCSDTLVMMSGFATFNDAISSQNSCSYCLA 114
+LL+ ++ +++ + FND +S++ CL+
Sbjct: 96 LLLLVANLIILPVAISFFNDDLSTRWIAFNCLS 128
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +2
Query: 344 QMMKKEIKWTLLFGKVTSPRNPI 412
Q ++KEI +++ + T+P NP+
Sbjct: 167 QKLQKEIPNSIILDQYTNPGNPL 189
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 6.9
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -1
Query: 215 SILLMCSDTLVMMSGFATFNDAISSQNSCS---YC 120
+ILL +D++ + +T+N +SS ++ S YC
Sbjct: 72 NILLRRTDSMDSQNSASTYNSFLSSDSASSGNVYC 106
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 322 FFVICHSLRIY 290
+ ICH LR+Y
Sbjct: 140 YLAICHPLRVY 150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,043
Number of Sequences: 438
Number of extensions: 3965
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -