Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0860
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.1  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 290 YRLIVIPILSEAVILFTLWTSPAVA----FYKFYPEI*VAEPAINT 165
           Y+L  +P LSE + LF   T PA+      +   PE+ V + A+ T
Sbjct: 146 YKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVVKGAMLT 191


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -3

Query: 290 YRLIVIPILSEAVILFTLWTSPAVA----FYKFYPEI*VAEPAINT 165
           Y+L  +P LSE + LF   T PA+      +   PE+ V + A+ T
Sbjct: 146 YKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVLPELDVVKGAMLT 191


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -2

Query: 537 LFLY-LISFVLLFYMDCIIYMLFLTVTCNSQFLHHISSHSLVQNWQVVSPL-TAGLCYTF 364
           +FL+ +I  ++L  + CII    ++         HI + SL    QVV  L T  L +  
Sbjct: 242 IFLFFIIPLIILLILYCIIAKNLMSNAATLVLNKHIDNISLRARKQVVLMLGTVVLSFFL 301

Query: 363 C 361
           C
Sbjct: 302 C 302


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = +3

Query: 189  SNFWVKFIERNSWTCPKCEQYNGFTEDGDYNKPIVNNVEETPKTPKVFQRT 341
            S   +K  ER+      C   N F  D      IV  V E P   KV  ++
Sbjct: 858  SGLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKS 908


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 530 FI*FHLYYSFTWT 492
           F+ FH Y +F WT
Sbjct: 121 FVLFHTYEAFVWT 133


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 139 YINLNIKVMHIADVIKISIDSISC 68
           +  LN  V H+   +  +IDS++C
Sbjct: 466 FSRLNFSVEHLLMELSRAIDSVAC 489


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 229 LVQSVNNITASLRMGITISL*SIMLKKLQKPQRYFKG 339
           LV  +  + A+L   +T++      K+  + +RYFKG
Sbjct: 382 LVLIIAPLIATLIATVTVNYYRHKQKRRDERERYFKG 418


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 311 SFFNIIDYRLIVIPILSEAVILFTLWTS 228
           S F +  Y LI  PI+ + V+L T W++
Sbjct: 251 SIFYMSAY-LISNPIMWDRVMLLTFWSA 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,917
Number of Sequences: 336
Number of extensions: 3416
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)