Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0860
(610 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 36 0.033
04_01_0227 - 2877303-2877659,2877755-2877897,2878102-2878183,287... 34 0.10
09_03_0051 + 11902322-11903125 31 0.71
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 31 0.71
01_03_0282 - 14580875-14580891,14582126-14585855 31 0.71
08_01_0722 + 6412654-6412860,6413142-6413687,6413745-6413877,641... 29 2.9
05_03_0259 - 11161447-11161706,11161764-11164266 29 3.8
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 29 3.8
03_02_0628 + 9957385-9957888,9957985-9958111,9958541-9958608,995... 28 5.0
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 27 8.8
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 27 8.8
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 27 8.8
06_01_0055 + 476204-476388,476481-476543,476684-476800,476920-47... 27 8.8
05_05_0018 - 21547649-21547875,21547973-21548187,21548831-215490... 27 8.8
02_03_0164 - 15862166-15862366,15862443-15862508,15862754-158630... 27 8.8
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 35.5 bits (78), Expect = 0.033
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 12/112 (10%)
Frame = +3
Query: 291 VNNVEETPKTPK----VFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENY 458
VN ++ P TPK V +R NG + + +Q +T+ N PM+ K+ D+ E
Sbjct: 244 VNGADQPPSTPKLSEVVLKRNEDENGKTEETLVAEQCNLTKDPN--PMSGKERDQVAEQC 301
Query: 459 RLQL-------EKAYKLCS-PCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQ 590
L +K ++C+ PC+ VV + +K K KL +++ KK+
Sbjct: 302 NLTKDPKPVSGQKCEQICNEPCEEVVLKRSSKSKRK-TDKKLMKKQQHSKKR 352
>04_01_0227 -
2877303-2877659,2877755-2877897,2878102-2878183,
2878289-2878291
Length = 194
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +3
Query: 330 FQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYRLQLEKAYKLCSPCKRV 509
+++ L N K ++Q+K + + ++K+ + EN +LEK K K
Sbjct: 86 YKKDLQNMKKQKEAVESKQIKQEEGYKLLQQEQRKWKRDKENLNSKLEKKTKETKDAKE- 144
Query: 510 VQMKLNKEKETLLGSKLSEQRTPEKKQNKINE 605
++K+ K ++ L +KL +R K+ ++ N+
Sbjct: 145 -ELKITKREKEYLNTKLETKREENKRLDEENK 175
>09_03_0051 + 11902322-11903125
Length = 267
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 245 FTLWTSPAVAFYKFYPEI*VAEPAINTPRQ*QP 147
F++++ P+ +FY F+P+ AEP TPR+ P
Sbjct: 69 FSIFSFPSASFYAFHPD--AAEPRTPTPRKRSP 99
>04_04_1358 +
32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 264 EDGDYNKPIVNNVEETPKTPKV-FQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYD 440
ED D N ++N +EE+ T + + + + C++ ++ L L M K YD
Sbjct: 670 EDSDSNCSVINGMEESENTKETDISKLMSEDDFCRLKDLGAGLHQKSLEELTMMAHKFYD 729
Query: 441 E 443
+
Sbjct: 730 D 730
>01_03_0282 - 14580875-14580891,14582126-14585855
Length = 1248
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 252 YIVHTLDKSSCCVL*ILPRNLSCRTSN*HATT 157
Y + TLD S CC L LP+N+ TS H T
Sbjct: 623 YNLQTLDLSDCCSLRCLPKNMKYMTSLRHLYT 654
>08_01_0722 +
6412654-6412860,6413142-6413687,6413745-6413877,
6413917-6414035,6414128-6414883,6415209-6415258,
6415560-6416679
Length = 976
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Frame = +3
Query: 225 WTCPKCEQYNGFTEDGDY-NKPIVNNVEETP-KTPKVFQRTLPNNGLCKMCNINQQLKVT 398
W P+ Y G +G++ N+P + ++ P KT + L N N ++++
Sbjct: 206 WNQPR-PYYQGDNNNGNFSNQPSLKDLVFAPAKTTDALSKKLAANDKLSF-NKMIEIQLA 263
Query: 399 QLANFVPMNEKKY-----DEEIENYR 461
QLA+ VP NE + D IEN +
Sbjct: 264 QLASLVPANETRRIPGQPDSSIENVK 289
>05_03_0259 - 11161447-11161706,11161764-11164266
Length = 920
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 252 NGFTEDG--DYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMN 425
NG+ + G D + N + + +F NGLCK+ + + KV Q V M
Sbjct: 332 NGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMR 391
Query: 426 EKKYDEE--IENYRLQ--LEKAYKLC 491
KY I+ Y + + KA+++C
Sbjct: 392 PDKYSYNTLIDGYCREGSMRKAFEMC 417
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 174 CWFCNSNFWVKFIERNSWTCPKCEQYN 254
C CN + K + W CP+C YN
Sbjct: 272 CLECNEHRPKKMLTGGEWECPQCVYYN 298
>03_02_0628 +
9957385-9957888,9957985-9958111,9958541-9958608,
9958695-9958772,9958885-9958949,9959130-9959196,
9959344-9959526,9959690-9959746,9959857-9959952,
9960061-9960219
Length = 467
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 432 KYDEEIENYRLQLEKAYKLCSPCKRVVQ-MKLNKEKETLLGSKLSEQRTPEKKQ 590
K +E E Y+ ++EK KL K+ + MK E + KL E+R KKQ
Sbjct: 369 KSNEVFETYKKEMEKMVKLIKDLKKDNEFMKSKCENSDVALVKLIEERELMKKQ 422
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/102 (24%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = +3
Query: 240 CEQYNGFTEDGDYNKPIVNNVEETPKTP--KVFQRTLPNNGLCKMCNINQQLKVTQLANF 413
CE++ E P N V E ++ L GLCK L + N
Sbjct: 289 CEEFGIIHERTPPYLPQSNGVAERKNRTLAEIVNAMLDTTGLCKEWWGEAVLTACYVLNK 348
Query: 414 VPMNEKKYDEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKE 539
+PM KK E R +L +Y C V + + K+++
Sbjct: 349 IPMKHKKVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRK 390
>09_04_0245 + 15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +3
Query: 81 SILIFITSAMCITLIFKLIYNLRLLLSWRVNCWFCNSNFWVKFIERNSWTCPKCEQYNGF 260
SIL+ I ++ C +F +L + W + S+F+ +I + C +C F
Sbjct: 1177 SILVAIAASYCF--LFPTASSLLTPILWHIMVGKAGSSFYGDYILDFNANCERCVVSLSF 1234
Query: 261 TEDGDYNK 284
+D D K
Sbjct: 1235 YKDNDEEK 1242
>08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Frame = +3
Query: 132 LIYNLRLLLSWRVNCWFCNS-------NFWVKFIERNS 224
L YNL+++ SW + C F + +FW + + NS
Sbjct: 1695 LYYNLKIIFSWNMECQFNSEEDSSTFLSFWDRLVHLNS 1732
>06_01_0055 +
476204-476388,476481-476543,476684-476800,476920-477328,
477448-477638,477706-477871
Length = 376
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 409 LASCVTFNCWFMLH 368
L +CV +CWF+LH
Sbjct: 192 LGNCVCLSCWFLLH 205
>05_05_0018 -
21547649-21547875,21547973-21548187,21548831-21549096,
21549534-21549657,21549946-21550041,21550179-21550294,
21550374-21550455,21550574-21550728,21550819-21551001,
21551114-21551305,21551389-21551564,21551676-21551729,
21552076-21552147,21552255-21552582
Length = 761
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 171 NCW-FCNSNFWVKFIERNSWTCPKCEQYNGFTED 269
+CW + NS+ +ER W+C C NGF +D
Sbjct: 55 HCWAYLNSHC---DMERWGWSCALCGTLNGFDDD 85
>02_03_0164 -
15862166-15862366,15862443-15862508,15862754-15863029,
15864869-15864989,15865091-15865368
Length = 313
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 513 VLLFYMDCIIYMLFLTVTCNSQFLHHISSHSLV 415
V+ FY C + V + F+HH+ SHSL+
Sbjct: 12 VVRFYATCFGFREPYRVLVDGTFVHHLLSHSLL 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,937,591
Number of Sequences: 37544
Number of extensions: 294315
Number of successful extensions: 734
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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