Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0860
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.9  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.5  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.7  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +3

Query: 432  KYDEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKINE 605
            K  EE+E  +L +EKA++  S  K+ +     +E E  +  +L  ++  +  + K+ E
Sbjct: 967  KLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKM-KRLEFEQILQTIETKLQE 1023


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/70 (24%), Positives = 30/70 (42%)
 Frame = +3

Query: 282 KPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYR 461
           +P     ++  K   V  RT+  N +C +C    +++      +VP+ E  Y   I N +
Sbjct: 332 EPTEREEQQMQKEAAVMARTMNLNQVC-LCFRAYRVE-PGTGRWVPICEPVYSNPINNMK 389

Query: 462 LQLEKAYKLC 491
             L    K+C
Sbjct: 390 SALTGELKIC 399


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = +3

Query: 444 EIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKIN 602
           +IEN   +L++        KR +Q +L+K ++T +  K  EQ+  E     +N
Sbjct: 637 QIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVN 689


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +3

Query: 417 PMNEKKYDEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNK 596
           P  E +    I    LQ    + + + C   V ++LN    T  GSK S +   ++ + K
Sbjct: 260 PSEEMRKTFSIVTSILQFVLPFIIMAFCYICVSIRLNDRARTKPGSKTSRREEADRDRKK 319


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 552 NLRGSLFLYLISFVLLFYMDCIIYMLFLTVTCNSQF 445
           NLR  + L + S  +   M   IYM  LT  C  +F
Sbjct: 269 NLRDVIILTMFSLSVFALMGLQIYMGVLTQKCIKEF 304


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +3

Query: 438 DEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNK 596
           ++E+E  R + E   +    C R + +K  K KE         Q + +++++K
Sbjct: 341 EKELEQVRPRYEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDK 393


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,469
Number of Sequences: 2352
Number of extensions: 12696
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)