Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0860
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49912-1|CAA90140.1|  588|Caenorhabditis elegans Hypothetical pr...   122   3e-28
AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical...    29   2.0  
Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical...    29   3.4  
Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical p...    28   4.5  
U00052-4|AAK21419.2|  438|Caenorhabditis elegans Hypothetical pr...    28   4.5  
DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like...    28   4.5  
Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF002197-2|AAB53983.2|  486|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z73102-7|CAA97420.1|  727|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z49132-6|CAA88985.1|  406|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AL117207-20|CAB60403.3|  228|Caenorhabditis elegans Hypothetical...    27   7.9  
AL023828-14|CAA19458.1|  269|Caenorhabditis elegans Hypothetical...    27   7.9  
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    27   7.9  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    27   7.9  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    27   7.9  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    27   7.9  

>Z49912-1|CAA90140.1|  588|Caenorhabditis elegans Hypothetical
           protein T24F1.2 protein.
          Length = 588

 Score =  122 bits (293), Expect = 3e-28
 Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 20/168 (11%)
 Frame = +3

Query: 96  ITSAMCITLIFKLIYN-LRLLLSWRVNCWFCNSNFWVKFIERNSWTCPKCEQYNGFTEDG 272
           + +A+ +     ++Y  +R  +   V CWFC  +  V++ +RNS+TCP CEQYNGFTEDG
Sbjct: 3   VAAAVGVIASVPILYKAIRPRIKTSVECWFCRKSTKVEYQQRNSFTCPSCEQYNGFTEDG 62

Query: 273 DYNKPIVNNVEETPK---TPKVFQRTLP----------------NNGLCKMCNINQQLKV 395
           DYN+ I      TPK    P   Q   P                +NGLC  CN+ Q++ +
Sbjct: 63  DYNRRIPGQAWTTPKRYCEPGKMQSEKPSTFLDRFGGVNMSPKASNGLCSECNLGQEIIM 122

Query: 396 TQLANFVPMNEKKYDEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKE 539
            ++A F P++E +++EE+E+YR +LE+ Y+LC  C   V  KL ++K+
Sbjct: 123 NKVAEFEPIDEDRWNEELEDYRYKLERMYQLCPRCTIQVHGKLEEDKK 170


>AL023835-11|CAA19495.1|  335|Caenorhabditis elegans Hypothetical
           protein Y37A1B.12 protein.
          Length = 335

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/62 (24%), Positives = 41/62 (66%)
 Frame = +3

Query: 264 EDGDYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDE 443
           +DG++ + +++++E  P++ KVF     ++G CK  +   +L+++++  F   +EK++++
Sbjct: 280 KDGEFMQRVLDSLEFFPESSKVFS----SSG-CKRVDAKTELEISKM-GFSLNSEKEFND 333

Query: 444 EI 449
           E+
Sbjct: 334 EL 335


>Z77656-1|CAB01141.2|  350|Caenorhabditis elegans Hypothetical
           protein F07B10.2 protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -2

Query: 492 CIIYMLFLTVTCNSQFLHHISSHSLVQNWQVVSPLTAGLCYTFCTSHC*VVSFEIPLGFL 313
           CI  M +  V    Q L HI   +L    +    L+ G+     T++C   +    L  L
Sbjct: 51  CIFTMFYSFVEIMLQPLIHIYDDTLFLIHRKRFDLSKGITRLIPTTYCWCYAMSFSLFAL 110

Query: 312 EFLQHY*L*AYCNPH 268
           +FL  Y   A C PH
Sbjct: 111 QFLYRY--VAVCKPH 123


>U80838-7|AAC71112.3|  581|Caenorhabditis elegans Hypothetical
           protein F47F6.3 protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 420 MNEKKYDEEIENYRLQLEKAYKLCSPCK 503
           +N KK DE+++N + + E A + C  C+
Sbjct: 499 LNRKKADEDVKNVKKRFEIAGRQCKKCR 526


>AL023835-12|CAA19484.1|  412|Caenorhabditis elegans Hypothetical
           protein Y37A1B.13 protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/62 (22%), Positives = 40/62 (64%)
 Frame = +3

Query: 264 EDGDYNKPIVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDE 443
           +DG++ + +++++E  P++ K+F     ++G CK  N    L+++++  F   ++K++++
Sbjct: 357 KDGEFMQRVLDSLEFFPESSKIFS----SSG-CKRVNAKTDLEISKM-GFSLNSKKEFND 410

Query: 444 EI 449
           E+
Sbjct: 411 EL 412


>Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical
           protein K07A1.8 protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 378 NQQLKVTQLANFVPMNEK-KYDEEIENYRLQLEK 476
           N+Q K   +A  +P  EK KYDEE E    + E+
Sbjct: 251 NEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQ 284


>U00052-4|AAK21419.2|  438|Caenorhabditis elegans Hypothetical
           protein K02F3.7 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 231 CPKCEQYNGFTEDGDYNKPIVNNVEETPKTPKVFQRTLPN 350
           CPK E+Y+ +     Y+K     V E PKT   FQ   P+
Sbjct: 175 CPKYERYH-YASQFIYSKAEKGKVLEGPKTSTTFQLLAPS 213


>DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like
           protein protein.
          Length = 492

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 378 NQQLKVTQLANFVPMNEK-KYDEEIENYRLQLEK 476
           N+Q K   +A  +P  EK KYDEE E    + E+
Sbjct: 251 NEQQKPVPVAEQIPQQEKQKYDEEFERQMKEYEQ 284


>Z92973-4|CAE18004.2|  328|Caenorhabditis elegans Hypothetical
           protein Y6G8.4 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = -2

Query: 567 VPIIWNLRGSLFL-------YLISFVLLFYMDCIIYM---LFLTVTCNSQFLHHISSHSL 418
           +PIIW  R +  L       YL  +V  F+ + +++    + L     +  +  I    L
Sbjct: 215 IPIIWRTRKNKTLMYSQQHAYLYRYV--FWQNVLVFSFKTIALPYLMENPEIDRILVGIL 272

Query: 417 VQNWQVVSPLTAGLCYTFCTSHC*VVSFEIPLGFLEFL 304
             ++  + PLT  L Y +C  HC  ++F I   FL+ L
Sbjct: 273 YNDFSTL-PLTIQLSYLWCNRHCLFINFNIKT-FLKVL 308


>Z49207-8|CAJ85773.1|  455|Caenorhabditis elegans Hypothetical
           protein R07E3.5b protein.
          Length = 455

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 522 LNKEKETLLGSKLSEQRTPEKKQNKIN 602
           +N+EK  ++ +KL E   PE KQ  ++
Sbjct: 22  INREKSDIIDAKLHETNVPEAKQTTVS 48


>Z49207-7|CAA89072.1|  512|Caenorhabditis elegans Hypothetical
           protein R07E3.5a protein.
          Length = 512

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 522 LNKEKETLLGSKLSEQRTPEKKQNKIN 602
           +N+EK  ++ +KL E   PE KQ  ++
Sbjct: 79  INREKSDIIDAKLHETNVPEAKQTTVS 105


>AF002197-2|AAB53983.2|  486|Caenorhabditis elegans Hypothetical
           protein F20H11.1 protein.
          Length = 486

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 171 NCWFCNSNFWVKFIERNSWTCPKCEQYNGFTE 266
           +C  C + +  K  ER S  CP+CE+    TE
Sbjct: 439 SCATCLAVYHKKCFERKSLNCPRCERRRKRTE 470


>Z73102-7|CAA97420.1|  727|Caenorhabditis elegans Hypothetical
           protein B0035.6 protein.
          Length = 727

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 513 VLLFYMDCIIYMLFLTVTCNSQFLHHIS 430
           VL  Y+DCII M    ++C  + + H S
Sbjct: 511 VLTEYLDCIITMGVFDISCADELMRHSS 538


>Z49132-6|CAA88985.1|  406|Caenorhabditis elegans Hypothetical
           protein ZK666.6 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 444 LHHISSHSLVQNWQVVSPLTAGLCYTFCTSHC 349
           L+  SS  L   WQ + PLT G  Y   T+ C
Sbjct: 357 LNQQSSVQLQSGWQNIKPLTTGANYVCETASC 388


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
           protein W02C12.1 protein.
          Length = 1372

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 204 KFIERNSWTCPKCEQYNG 257
           K + ++ WT PKCEQ NG
Sbjct: 241 KCVCKSGWTGPKCEQDNG 258


>AL117207-20|CAB60403.3|  228|Caenorhabditis elegans Hypothetical
           protein Y60A3A.19a protein.
          Length = 228

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 144 LRLLLSWRVNCWFCNSNFWVKFIER 218
           L +++SW +  WFC   F V FI R
Sbjct: 117 LNIVVSWIITIWFC-GGFMVYFIAR 140


>AL023828-14|CAA19458.1|  269|Caenorhabditis elegans Hypothetical
           protein Y17G7B.12 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 492 SPCKRVVQMKLNKEK-ETLLGSKLSEQRTPE 581
           SP  +V+QMKLN+EK E    +K  ++  PE
Sbjct: 16  SPAWKVLQMKLNEEKAEKEKAAKAEKEANPE 46


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 222  SWTCPKCEQYNGFTEDGDY 278
            +WT P+CEQ NG   D +Y
Sbjct: 2642 TWTQPECEQRNGKITDYEY 2660


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 222  SWTCPKCEQYNGFTEDGDY 278
            +WT P+CEQ NG   D +Y
Sbjct: 2642 TWTQPECEQRNGKITDYEY 2660


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 222  SWTCPKCEQYNGFTEDGDY 278
            +WT P+CEQ NG   D +Y
Sbjct: 2642 TWTQPECEQRNGKITDYEY 2660


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 222  SWTCPKCEQYNGFTEDGDY 278
            +WT P+CEQ NG   D +Y
Sbjct: 2642 TWTQPECEQRNGKITDYEY 2660


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,008,496
Number of Sequences: 27780
Number of extensions: 304592
Number of successful extensions: 1136
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)