Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0860
(610 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53350.3 68416.m05888 myosin heavy chain-related low similari... 30 1.0
At3g53350.2 68416.m05887 myosin heavy chain-related low similari... 30 1.0
At3g53350.1 68416.m05886 myosin heavy chain-related low similari... 30 1.0
At2g23910.1 68415.m02855 cinnamoyl-CoA reductase-related similar... 29 2.4
At5g13560.1 68418.m01566 expressed protein weak similarity to SP... 29 3.2
At5g66310.1 68418.m08360 kinesin motor family protein contains P... 28 4.2
At4g23490.1 68417.m03384 fringe-related protein + weak similari... 28 4.2
At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) fa... 28 4.2
At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4) ... 28 4.2
At3g04910.1 68416.m00533 protein kinase family protein contains ... 28 5.6
At4g22970.1 68417.m03315 peptidase C50 family protein contains P... 27 7.4
At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containi... 27 7.4
At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containi... 27 7.4
At1g10530.1 68414.m01186 expressed protein 27 7.4
At5g53580.1 68418.m06657 aldo/keto reductase family protein cont... 27 9.7
At5g17790.1 68418.m02086 zinc finger (Ran-binding) family protei... 27 9.7
At2g34570.1 68415.m04247 expressed protein contains Pfam profil... 27 9.7
At2g26970.1 68415.m03235 exonuclease family protein contains exo... 27 9.7
>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/107 (22%), Positives = 47/107 (43%)
Frame = +3
Query: 288 IVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYRLQ 467
+V +EE + ++ L + N+++Q ++TQL + V E +Y EE LQ
Sbjct: 190 LVRQLEEERVNSRDSSSSMEVEELKEAMNLSRQ-EITQLKSAVEAAETRYQEEYIQSTLQ 248
Query: 468 LEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKINEN 608
+ AY+ K + + E L +K + ++ K+ E+
Sbjct: 249 IRSAYEQTEAVKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKED 295
>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/107 (22%), Positives = 47/107 (43%)
Frame = +3
Query: 288 IVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYRLQ 467
+V +EE + ++ L + N+++Q ++TQL + V E +Y EE LQ
Sbjct: 190 LVRQLEEERVNSRDSSSSMEVEELKEAMNLSRQ-EITQLKSAVEAAETRYQEEYIQSTLQ 248
Query: 468 LEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKINEN 608
+ AY+ K + + E L +K + ++ K+ E+
Sbjct: 249 IRSAYEQTEAVKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKED 295
>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
to filamin-interacting protein S-FILIP [Rattus
norvegicus] GI:21392397, nonmuscle heavy chain myosin
II-A [Mus musculus] GI:17978023
Length = 396
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/107 (22%), Positives = 47/107 (43%)
Frame = +3
Query: 288 IVNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYRLQ 467
+V +EE + ++ L + N+++Q ++TQL + V E +Y EE LQ
Sbjct: 192 LVRQLEEERVNSRDSSSSMEVEELKEAMNLSRQ-EITQLKSAVEAAETRYQEEYIQSTLQ 250
Query: 468 LEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKINEN 608
+ AY+ K + + E L +K + ++ K+ E+
Sbjct: 251 IRSAYEQTEAVKSRYSQREAELTEELNRTKDEIEGLRKELMEKVKED 297
>At2g23910.1 68415.m02855 cinnamoyl-CoA reductase-related similar to
cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
Saccharum officinarum [GI:3341511]
Length = 304
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 471 EKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKINE 605
E+A KL ++ M EKE + GS++ E+R KK NK+ E
Sbjct: 256 EEALKLVQTLSPLIPMPPRHEKE-MQGSEVYEERLRNKKLNKLVE 299
>At5g13560.1 68418.m01566 expressed protein weak similarity to
SP|O42184 Restin (Cytoplasmic linker protein-170)
(CLIP-170) {Gallus gallus}
Length = 679
Score = 28.7 bits (61), Expect = 3.2
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +3
Query: 303 EETPKTPKVFQRTLPNNGLCKMCNINQQLKVTQLANFVPMNEKKYDEEIENYRLQLEKAY 482
+ETP T + F+ TL LC ++ QL+N + + ++++ R+ LE
Sbjct: 257 KETPLTIEAFKETLAKIRLCSRLE-GLLIRKRQLSN--GDSPDIHAQKVDKLRVLLESLA 313
Query: 483 KLCSPC-KRVVQMKLNKEKETLLGSKLSEQRTPEKKQ 590
S KR+ + +L KE E L + T EK++
Sbjct: 314 NSTSKAEKRISENRLQKE-EALKARVVKANETGEKEK 349
>At5g66310.1 68418.m08360 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1063
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 396 TQLANFVPMNEKKYDEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETL 545
T L + +K +E+ QLE+A +R+V+ + N+EKETL
Sbjct: 385 TALLTEKDLEVEKLKKEVFQLAQQLEQARSEIKDLRRMVEEEKNQEKETL 434
>At4g23490.1 68417.m03384 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 526
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 585 SSQEFSVPIIWNLR---GSLFLYLISFVLLFYMDCIIYMLFLTVTCNS 451
SS S+P +W+L L ++LI F++ Y IIYML L T S
Sbjct: 17 SSSSTSIPGMWSLTRPGPKLMVWLICFIVFTY---IIYMLKLVSTSRS 61
>At4g17910.1 68417.m02669 zinc finger (C3HC4-type RING finger) family
protein / pentatricopeptide (PPR) repeat-containing
protein contains Pfam domains PF01535: PPR repeat and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1208
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -2
Query: 405 QVVSP--LTAGLCYTFCTSHC*VVSFE-IPLGFLEFL 304
Q ++P T GLC TFC C ++F P+ + +FL
Sbjct: 910 QYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFL 946
>At3g52430.1 68416.m05766 phytoalexin-deficient 4 protein (PAD4)
identical to phytoalexin-deficient 4 protein
[Arabidopsis thaliana] GI:6457331; contains Pfam profile
PF01764: Lipase
Length = 541
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -1
Query: 607 FSLILFCFFSGVLCSDNLEPKRVSFSLFNFICT--TLLHGLHNLYAFS 470
F LFC G +C DN R+ F++ N T T H + Y F+
Sbjct: 191 FGTYLFCSDKGGVCLDNAGSVRLMFNILNTTATQNTEEHQRYGHYVFT 238
>At3g04910.1 68416.m00533 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 700
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 586 FFSGVLCSDNLEPKRVSFSLFNFICTTLLHGLHNLYA 476
F SG L L KRV+ C +L GLH L++
Sbjct: 107 FTSGTLRQYRLRHKRVNIRAMKHWCRQILRGLHYLHS 143
>At4g22970.1 68417.m03315 peptidase C50 family protein contains Pfam
PF03568: Peptidase family C50
Length = 1773
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 438 DEEIENYRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKL 560
D+E L L +AY+LC C +V +L + T+ +L
Sbjct: 75 DKEARESALDLFRAYELCLDCLELVSAQLACKPHTVQSQRL 115
>At3g54980.1 68416.m06100 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 851
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +3
Query: 231 CPKCEQYN----GFTEDGDYNKPIVNNVEETPK--TPKVFQRTLPNNGLCKMCNINQQLK 392
C C YN GF ++G+ + + E +P V T NGLCK ++Q L+
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 393 V 395
+
Sbjct: 641 M 641
>At2g39230.1 68415.m04818 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 867
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +3
Query: 240 CEQYN----GFTEDGDYNKPI--VNNVEETPKTPKVFQRTLPNNGLCKMCNINQQLKVT 398
C YN GF + GD + + + E K+P V T NG CK ++ L++T
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
>At1g10530.1 68414.m01186 expressed protein
Length = 166
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 501 KRVVQMKLNKEKETLLGSKLSEQRTPEKKQNK 596
K+ + K ++ ++T K S+++ PEKKQ K
Sbjct: 106 KKSAKTKKHQIEKTTTAKKFSDKKVPEKKQGK 137
>At5g53580.1 68418.m06657 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 365
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 438 DEEIEN-YRLQLEKAYKLCSPCKRVVQMKLNKEKETLLGSKLSEQRTPEKKQNKI 599
D++++ + L LE L +LN + E LLG + E + + KQN++
Sbjct: 70 DDQLQQAFELALENGINLFDTADSYGTGRLNGQSERLLGKFIKESQGLKGKQNEV 124
>At5g17790.1 68418.m02086 zinc finger (Ran-binding) family protein
contains Pfam domain, PF00641: Zn-finger in Ran binding
protein and others
Length = 758
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 168 VNCWFCNSNFWVKFIERNSWTCPKCEQYN 254
V C+ C+ + + + W CP+C+ YN
Sbjct: 294 VKCFQCDEARPKRQLTGSEWECPQCDFYN 322
>At2g34570.1 68415.m04247 expressed protein contains Pfam profile:
PF04900 protein of unknown function, DUF652
Length = 281
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -2
Query: 504 FYMDCIIYMLFLTVTCNSQFLHHISSHSLVQNWQVVSPLTAGLCYTFCTSHC*VVSFE 331
F+ C + V C+ F+HH+ ++ + VS L G F T+ C + E
Sbjct: 15 FFTVCYGFRQPYKVLCDGTFVHHLVTNEITPADTAVSELLGGPVKLF-TTRCVIAELE 71
>At2g26970.1 68415.m03235 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 222
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 243 EQYNGFTEDGDYNKPIV 293
E NG EDGDY +P+V
Sbjct: 31 ESVNGSLEDGDYKQPLV 47
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,785,975
Number of Sequences: 28952
Number of extensions: 263136
Number of successful extensions: 794
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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