Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0859
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   1.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 277 RLIQLDSK-SV*STLLASHSHTKRVLCHM 194
           RLI  D+K    ST++    H KR+LC++
Sbjct: 109 RLIHFDTKCQENSTVIDYKRHKKRLLCYL 137


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 277 RLIQLDSK-SV*STLLASHSHTKRVLCHM 194
           RLI  D+K    ST++    H KR+LC++
Sbjct: 127 RLIHFDTKCQENSTVIDYKRHKKRLLCYL 155


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
 Frame = +2

Query: 74  KRVGSALVVSQTSVPPYGERKGWVPRRDE-----DFADGGAFPEIHVAQYP-LGMG 223
           K+  +ALV+ Q      GE     P + +     DF   G FP IH +  P LG G
Sbjct: 202 KKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSIHNSINPFLGQG 257


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 210 RLVWECEARRVLQTLLLSSWMSLGESNIL 296
           R  W+CE ++ ++ L+     SL   N+L
Sbjct: 43  RYTWKCENQKCVKYLVEDEETSLATCNML 71


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 326 KIIYS---KLTDLLPSEVLAEDDPTLQKPDEDDI 418
           K++Y+    +TDL+   +L ED+P  +K  +D +
Sbjct: 20  KVMYNGNNNVTDLVEYVLLNEDNPCARKCVKDSV 53


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 377 EDDPTLQKPDEDDIQD 424
           EDD  +  P++DD +D
Sbjct: 228 EDDDNISDPEDDDDKD 243


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 94  CSVPDQCATLR*EERMGTSKRRRFCRWRSIPRDPCG 201
           C + D C+ ++  E+     R  F R  +  R P G
Sbjct: 378 CHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLG 413


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 94  CSVPDQCATLR*EERMGTSKRRRFCRWRSIPRDPCG 201
           C + D C+ ++  E+     R  F R  +  R P G
Sbjct: 385 CHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLG 420


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,954
Number of Sequences: 336
Number of extensions: 3442
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)