Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0859
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0819 - 32014236-32016059 170 9e-43
06_01_0804 + 6038640-6040262 134 4e-32
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 30 1.6
08_02_1448 - 27168389-27172021 29 2.9
01_01_0867 - 6773411-6774682,6775008-6775643 29 2.9
01_06_1570 + 38312319-38314259 29 3.8
03_05_0785 - 27683380-27683742 28 5.0
01_06_1493 + 37753816-37755558 28 5.0
01_06_1490 - 37732724-37735020,37735803-37735980 28 5.0
06_01_0771 - 5768086-5768090,5768905-5769156,5769282-5769660 28 6.7
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 28 6.7
02_04_0602 - 24259703-24259918,24261663-24261821 28 6.7
01_05_0514 - 22876264-22878567 28 6.7
07_03_0935 - 22738221-22738328,22739207-22739237,22739901-227400... 27 8.8
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 27 8.8
>02_05_0819 - 32014236-32016059
Length = 607
Score = 170 bits (413), Expect = 9e-43
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Frame = +2
Query: 113 VPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPLGMGMRGKESTSNALAVQLDESGRVKY 292
VPPYG+R G+VPRR EDF DGGAFPEIHVAQYPLGMG R ++ S LA+ +D G V +
Sbjct: 54 VPPYGKRGGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSKILALTVDAKGSVAF 113
Query: 293 SAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPD-EDDIQDITEKTKLALEKLTNA 469
A+ +QG +A KI+YSK +DL+P A+ + T + + I++ TE+TK ALEK+ N
Sbjct: 114 DAVVKQGENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEETTERTKAALEKVVNV 173
Query: 470 KISXXXXXXXXXXXXXXQYIRYTPAQQGGSYNSGAKQRVIRMVE 601
++S ++I+Y P+QQ ++NSGAK+R+IRM E
Sbjct: 174 RLSAAQPKNVPTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSE 217
>06_01_0804 + 6038640-6040262
Length = 540
Score = 134 bits (325), Expect = 4e-32
Identities = 71/173 (41%), Positives = 100/173 (57%), Gaps = 8/173 (4%)
Frame = +2
Query: 113 VPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPLGMGMRG-------KESTSNALAVQLD 271
VPPYG R PRR EDF DGGAFPE+HVAQYPL MG RG + S+ L++ +D
Sbjct: 48 VPPYGRRSALAPRRKEDFGDGGAFPEVHVAQYPLDMGRRGGDGDGEQRGSSGGVLSLTVD 107
Query: 272 ES-GRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDITEKTKLA 448
S GRV++ A+ RQG +A K +YS D+LP A D ++ +++ T +T A
Sbjct: 108 GSGGRVEFDAVVRQGENAGKTVYSSPGDVLPKINAAAAD--ADDDEQAAVEETTARTSAA 165
Query: 449 LEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQGGSYNSGAKQRVIRMVEAQ 607
L + ++S ++I+YTPA+Q ++NSGA +R+IRM E Q
Sbjct: 166 LRAIVEKRLSAVQPSNTLASNHDPEFIKYTPARQTSAFNSGAAERIIRMGETQ 218
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/88 (21%), Positives = 32/88 (36%)
Frame = +2
Query: 32 PSQQVWDRDDELKAKRVGSALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHVAQYP 211
PS W L R+GS + P + + G FA+G + I P
Sbjct: 76 PSSYAWSNGISLGGSRLGSNSQILNNGNPHWEQHHG-ASLGTSSFANGAVYSNIQNLMRP 134
Query: 212 LGMGMRGKESTSNALAVQLDESGRVKYS 295
+G +S++L + + +YS
Sbjct: 135 MGSVNNKVNQSSHSLPASMSKGSGNQYS 162
>08_02_1448 - 27168389-27172021
Length = 1210
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 153 ETKILQMAEHSQRSMWHSTRLVWECEARRVLQTLLLSSWMSLGESNILRLPDKDT 317
+T + +M + R H +W C + LL S + L + ++PDKDT
Sbjct: 204 KTTLAKMVYNDTRVRDHFQLKMWHCVSENFEAVPLLKSIVELATNRRCQVPDKDT 258
>01_01_0867 - 6773411-6774682,6775008-6775643
Length = 635
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +1
Query: 460 DQCQNISGDASESCTQSCA----CSIYSVHSSATRW 555
D QN++ SE C +C C+ YS HS W
Sbjct: 216 DNPQNVTAATSEECQAACLSECFCAAYSYHSGCKIW 251
>01_06_1570 + 38312319-38314259
Length = 646
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 336 YIILSALCPCLAIAEYLTLPDSSSWTARAFEVLSLPRIPIPSGYCATWISGNAPPSAKSS 157
++++ LC + +A T+P++ +V LP P P G + G A SA SS
Sbjct: 573 FVLVGILCAHVTVACRPTMPEALRMLEGDMDVPDLPERPQPYGQRIAFDEGEANFSA-SS 631
Query: 156 SLRGTHPFL 130
L G PF+
Sbjct: 632 VLSGP-PFM 639
>03_05_0785 - 27683380-27683742
Length = 120
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +2
Query: 113 VPPYGER--KGWVPRRDEDFADGGAFPEIHVAQYPLG 217
V P G+R +GWV RR D G P AQ P G
Sbjct: 76 VAPSGDRDVEGWVERRCRSCLDSGLPPPPATAQQPQG 112
>01_06_1493 + 37753816-37755558
Length = 580
Score = 28.3 bits (60), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 493 ESCTQSCACSIYSVHSSATRW 555
++C +SC+C+ YS + S + W
Sbjct: 159 QACLRSCSCTAYSYNGSCSLW 179
>01_06_1490 - 37732724-37735020,37735803-37735980
Length = 824
Score = 28.3 bits (60), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 493 ESCTQSCACSIYSVHSSATRW 555
++C +SC+C+ YS + S + W
Sbjct: 390 QACLRSCSCTAYSYNGSCSLW 410
>06_01_0771 - 5768086-5768090,5768905-5769156,5769282-5769660
Length = 211
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 163 IFVSSRYPSFPLTVRWHTGLGHYKSTPDTFSLQLIISIP 47
++V +R PSF L + T G Y ++ ++ QLI +P
Sbjct: 83 VYVLARQPSFDLATTYITCRGSYAASVAQWTQQLIRGVP 121
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 230 GKESTSNALAVQLDESG-RVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPD 406
G+ +++NA + +DE + KY + S DK+ K D EDD TL +
Sbjct: 282 GESTSNNASCIVIDEEQTKAKYLPVP----SDDKVSDEKPDDSSVLNEKIEDDETLAEKA 337
Query: 407 EDD 415
EDD
Sbjct: 338 EDD 340
>02_04_0602 - 24259703-24259918,24261663-24261821
Length = 124
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 359 PSEVLAEDDPTLQKPDEDDIQDITE 433
P E EDDP ++P+EDD TE
Sbjct: 100 PQEEPQEDDPDKEEPEEDDPDKPTE 124
>01_05_0514 - 22876264-22878567
Length = 767
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 484 DASESCTQSCACSIYSVHSSATRW 555
D +C +C+C+ YS + S T W
Sbjct: 330 DCELACLGNCSCTAYSYNGSCTLW 353
>07_03_0935 -
22738221-22738328,22739207-22739237,22739901-22740095,
22740693-22740782,22740900-22741037,22741959-22742108,
22743589-22744766
Length = 629
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 237 SLPRIPIPSGYCATWISGNAPPSAKSSSLRGTHPFLSP*GGTLVWD 100
S P P+ +G+ A W+ G A + LR FL+P L+ D
Sbjct: 213 SAPETPLRAGW-ARWLEGKADYLRRDRMLRSNLEFLNPRNHPLLQD 257
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = +2
Query: 215 GMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTL 394
G G + + AL D+S ++ G ++ K DL P + ED+
Sbjct: 410 GAESSGDDGNNEALEKGEDDSSLKDDGSLKDDGKVVKAVVVIKEEDLQPKKSKGEDEKEQ 469
Query: 395 --QKPDEDDIQDITEKTKLALEK 457
+K D D+ DI + K A ++
Sbjct: 470 GDKKMDSADVVDIAVEKKQATKR 492
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,670,542
Number of Sequences: 37544
Number of extensions: 422360
Number of successful extensions: 1482
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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