Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0859
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44017| Best HMM Match : SKIP_SNW (HMM E-Value=0) 204 3e-53
SB_51381| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42805| Best HMM Match : Aminotran_5 (HMM E-Value=8.7e-25) 29 2.9
SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06) 29 3.9
SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_20987| Best HMM Match : Pyridoxal_deC (HMM E-Value=0) 28 5.1
SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.0
SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06) 27 9.0
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_44017| Best HMM Match : SKIP_SNW (HMM E-Value=0)
Length = 754
Score = 204 bits (499), Expect = 3e-53
Identities = 96/187 (51%), Positives = 128/187 (68%), Gaps = 1/187 (0%)
Frame = +2
Query: 50 DRDDEL-KAKRVGSALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPLGMGM 226
+ DDEL +A + S+ PPYG RKGW+PR+ EDF DGGAFPEIHVAQ+PL MG
Sbjct: 240 NEDDELERAYNQLNVSAGSKKDPPPYGRRKGWIPRKLEDFGDGGAFPEIHVAQFPLDMGR 299
Query: 227 RGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPD 406
K +SNA+ VQLD GRVKY AI +Q DK+++S+ TDL+P+ + + + L PD
Sbjct: 300 ARKAKSSNAIPVQLDAQGRVKYDAIVKQSQKKDKVVHSRFTDLVPAHLKEDGESDLMLPD 359
Query: 407 EDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQGGSYNSGAKQRV 586
E++++ +T+KT+ ALEK+ N+KI+ QYIRYTP+QQG ++NSGAKQRV
Sbjct: 360 EEEVKSVTDKTREALEKVVNSKIAAAQPAKAAERPQAAQYIRYTPSQQGAAFNSGAKQRV 419
Query: 587 IRMVEAQ 607
IRMVE Q
Sbjct: 420 IRMVEMQ 426
>SB_51381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 30.7 bits (66), Expect = 0.97
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 201 HSTRLVWECEARRVLQTLLLSSWMSL 278
H++ +W C R+V L +SSW+SL
Sbjct: 51 HASPNIWRCRHRKVSVNLKISSWLSL 76
>SB_38522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 839
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 125 GERKGWVPRRDEDFADGGAFPEIHVAQYPLGMGMRGKESTSNALAVQLDE 274
G+R PR DEDF A+ +H A Y G ++G + L D+
Sbjct: 248 GKRAAVSPRVDEDFKFRRAYSYLHFAYYKTGQIIKGARAAYTFLETSPDD 297
>SB_15812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 505 GCSFHWHRR*YFGIGQFLECEFSLLGDILNVV-LVWFLQC 389
G HW ++ +G L+C F LLG I+ V LV+ + C
Sbjct: 96 GHVLHWTTESFYTVGPHLDCYFFLLGAIMLVSWLVFVVVC 135
>SB_54074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 222 PIPSGYCATWISGNAPPSAKSSSLRGTHPFLSP*GGTL 109
P+ G C+TW +G P +R H F P G+L
Sbjct: 593 PVHYGVCSTWFNGLKPGDIVPCFVRKAHSFHLPDDGSL 630
>SB_42074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 521 QYIRYTPAQQGGSYNSGAKQRV 586
QYI YTP QG Y GA+ V
Sbjct: 49 QYINYTPGHQGSGYMYGAEYEV 70
>SB_42805| Best HMM Match : Aminotran_5 (HMM E-Value=8.7e-25)
Length = 357
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 115 HTGLGHYKSTPDTFSLQLIISIPHLLTRGRQ 23
HT + HYK +T ++ IPH++T ++
Sbjct: 24 HTAIEHYKKQRETTGRAILPPIPHIITSNQE 54
>SB_48071| Best HMM Match : AAA_5 (HMM E-Value=3.1e-06)
Length = 1532
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 281 RVKYSAIARQGHSADKIIYSK---LTDLLPSEVLAEDDPTLQKPDEDDIQDITEKTKLAL 451
R+ I R+ H+A+K I L ++++ E L KP DDIQ K +
Sbjct: 32 RLSLDTIKRRMHTANKYIGENGQGRAALFKADIVLEIPSVLMKPSLDDIQQALNKAVQIM 91
Query: 452 EKLTNA 469
K T +
Sbjct: 92 LKTTQS 97
>SB_38103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 323 DKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQ 421
D + Y KL+D + ++L DP LQK + DI+
Sbjct: 606 DMVAYCKLSDHVFYQILHSTDPQLQKEEIPDIR 638
>SB_26236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 403 RRGRHSRYHRED*TRTREIDQCQNISGDAS 492
+ GRHSR +D R DQ N S DAS
Sbjct: 265 KEGRHSRADTDDTDSLRSNDQKSNASSDAS 294
>SB_20987| Best HMM Match : Pyridoxal_deC (HMM E-Value=0)
Length = 292
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 174 PSAKSSSLRGTHPF-LSP*G-GTLVWDTTRALPTRLAFN 64
P KS S G H F L+P G G ++W ALP L FN
Sbjct: 190 PRVKSISASG-HKFGLAPLGCGWVIWRDEEALPQELVFN 227
>SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1
Query: 332 LSCQRCVLVWQSQNI*LSQTHPAGQQERLKYSPCLAFPYQAGTVPHGSLGMLRHLQNLRL 153
+SC R V + + N+ LSQ H G R++++P Y+A +GSLG L + L+L
Sbjct: 428 ISCDR-VRSYGNLNLFLSQKHCPGVIIRIRHAPDAQDKYEA---EYGSLGRLLCTKVLQL 483
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +2
Query: 32 PSQQVWDRDDELKAKRVGSALVVSQTSVPPYGER-KGWVPRRDEDFADGGAFPEIHVAQY 208
PS + R D+L + V TS P + W RD+ G +
Sbjct: 1186 PSTSAFRRPDKLDLSQSEPTTPVKSTSPFPLNSPDQNWPDHRDDTSTSSGGSTSRRLEHS 1245
Query: 209 PLGMGMRGKESTS 247
P G+ + + +TS
Sbjct: 1246 PFGLNLHHRRTTS 1258
>SB_47007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 521 QYIRYTPAQQGGSYNSGAKQRV 586
QYI YTP Q Y GA+ +V
Sbjct: 385 QYINYTPGHQNSGYMYGAEYQV 406
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 521 QYIRYTPAQQGGSYNSGAKQRV 586
QYI YTP Q Y GA+ +V
Sbjct: 158 QYINYTPGHQSSGYMYGAEYQV 179
>SB_54629| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1296
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -2
Query: 241 TLLASHSHTKRVLCHMDLWECSAICKIFVSSRYPSFPLTVRWHTGLGHYK 92
+L A H +R+ H D +EC K+F+ R S L R HTG Y+
Sbjct: 952 SLDALQGHMRRM--HQDPFECPCCNKVFLKQRQYSHHL--RTHTGEQPYR 997
>SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 353 SLSILNILSCQR-CVLVWQSQNI*LSQTHPAGQQERL 246
S + L +L+C R C++ Q +I L Q + A ++ERL
Sbjct: 243 SSAFLLVLACTRICIMELQKDHILLQQHYAATEEERL 279
>SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06)
Length = 932
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = -1
Query: 200 PHGSLGMLRHLQNL---RLFEVPILSSHRK 120
PH ++G +R NL + FEVP ++++RK
Sbjct: 350 PHTAVGKIREALNLMRNQFFEVPFIANYRK 379
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 521 QYIRYTPAQQGGSYNSGAKQRV 586
QYI YTP Q Y GA+ +V
Sbjct: 42 QYINYTPGHQSSGYMYGAEYQV 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,976,215
Number of Sequences: 59808
Number of extensions: 470509
Number of successful extensions: 1544
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1544
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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