Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0859
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip prot... 226 4e-59
CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein. 226 4e-59
BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein... 226 4e-59
BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein... 226 4e-59
BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1... 226 4e-59
BC105585-1|AAI05586.1| 288|Homo sapiens SNW1 protein protein. 226 4e-59
BC065286-1|AAH65286.1| 319|Homo sapiens SNW1 protein protein. 226 4e-59
BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein. 226 4e-59
BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein. 226 4e-59
AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor coacti... 226 4e-59
AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor coacti... 226 4e-59
Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61) p... 33 0.60
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot... 33 0.60
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein. 33 0.60
AL365436-4|CAO03532.1| 335|Homo sapiens tuftelin 1 protein. 33 0.79
AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein. 31 3.2
BC002933-1|AAH02933.1| 365|Homo sapiens TUFT1 protein protein. 31 4.2
AY358610-1|AAQ88973.1| 199|Homo sapiens TUFT1 protein. 31 4.2
AL365436-6|CAI16592.1| 365|Homo sapiens tuftelin 1 protein. 31 4.2
AK075001-1|BAC11346.1| 365|Homo sapiens protein ( Homo sapiens ... 31 4.2
BC008301-1|AAH08301.1| 390|Homo sapiens tuftelin 1 protein. 30 7.3
AL365436-5|CAI16591.1| 390|Homo sapiens tuftelin 1 protein. 30 7.3
AK223161-1|BAD96881.1| 390|Homo sapiens tuftelin 1 variant prot... 30 7.3
AF254860-1|AAF78914.1| 390|Homo sapiens tuftelin 1 protein. 30 7.3
AF254260-1|AAF78913.1| 390|Homo sapiens tuftelin 1 protein. 30 7.3
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 29 9.7
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 29 9.7
>U51432-1|AAC15912.1| 536|Homo sapiens nuclear protein Skip
protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>CR457433-1|CAG33714.1| 536|Homo sapiens SNW1 protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BT020061-1|AAV38864.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BT020060-1|AAV38863.1| 536|Homo sapiens SKI-interacting protein
protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BC108903-1|AAI08904.1| 536|Homo sapiens SNW domain containing 1
protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BC105585-1|AAI05586.1| 288|Homo sapiens SNW1 protein protein.
Length = 288
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BC065286-1|AAH65286.1| 319|Homo sapiens SNW1 protein protein.
Length = 319
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>BC046105-1|AAH46105.2| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 3 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 62
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 63 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 120
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 121 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 180
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 181 VAFNSGAKQRVIRMVEMQ 198
>BC040112-1|AAH40112.1| 531|Homo sapiens SNW1 protein protein.
Length = 531
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 3 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 62
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 63 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 120
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 121 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 180
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 181 VAFNSGAKQRVIRMVEMQ 198
>AF045184-1|AAC31697.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>AC008372-1|AAF23325.1| 536|Homo sapiens nuclear receptor
coactivator NCoA-62 protein.
Length = 536
Score = 226 bits (553), Expect = 4e-59
Identities = 115/198 (58%), Positives = 142/198 (71%), Gaps = 4/198 (2%)
Frame = +2
Query: 26 PAPSQQVWDR-DDELKAKRVGS---ALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEI 193
PAP+Q D+ + E KA+ S +LV S+ PPYG RKGW+PR EDF DGGAFPEI
Sbjct: 8 PAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEI 67
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVL 373
HVAQYPL MG K+ SNALA+Q+D G++KY AIARQG S DK+IYSK TDL+P EV+
Sbjct: 68 HVAQYPLDMGR--KKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVM 125
Query: 374 AEDDPTLQKPDEDDIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQG 553
DDP LQ+PDE+ I++ITEKT++ALEK + K++ QYIRYTP+QQG
Sbjct: 126 NADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQG 185
Query: 554 GSYNSGAKQRVIRMVEAQ 607
++NSGAKQRVIRMVE Q
Sbjct: 186 VAFNSGAKQRVIRMVEMQ 203
>Z49769-1|CAA89839.1| 959|Homo sapiens cL27F12.1 (exons 42-61)
protein.
Length = 959
Score = 33.5 bits (73), Expect = 0.60
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +2
Query: 92 LVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHV 199
LV S T VPP + GW P+ DF G AFPEI V
Sbjct: 545 LVNSYTRVPPLVWKLGWSPKPGGDF--GTAFPEIPV 578
>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
protein.
Length = 3144
Score = 33.5 bits (73), Expect = 0.60
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +2
Query: 92 LVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHV 199
LV S T VPP + GW P+ DF G AFPEI V
Sbjct: 2406 LVNSYTRVPPLVWKLGWSPKPGGDF--GTAFPEIPV 2439
>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
Length = 3144
Score = 33.5 bits (73), Expect = 0.60
Identities = 19/36 (52%), Positives = 21/36 (58%)
Frame = +2
Query: 92 LVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHV 199
LV S T VPP + GW P+ DF G AFPEI V
Sbjct: 2406 LVNSYTRVPPLVWKLGWSPKPGGDF--GTAFPEIPV 2439
>AL365436-4|CAO03532.1| 335|Homo sapiens tuftelin 1 protein.
Length = 335
Score = 33.1 bits (72), Expect = 0.79
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLL 358
PE A M S ++LA +L ES G + + +G S DK+I+ K + L
Sbjct: 15 PEDQAAAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQL 74
Query: 359 PSEVLAEDDPTLQKPD 406
SEV + L+KP+
Sbjct: 75 KSEVQYIQEVVLEKPN 90
>AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein.
Length = 554
Score = 31.1 bits (67), Expect = 3.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 130 EERMGTSKRRRFCRWRSIPRDPCGTVPAWYGNARQG 237
E T CR RS+P++ CG VPA + + +G
Sbjct: 476 ESEPNTRDTPALCRGRSLPQESCGAVPAGHRSPLRG 511
>BC002933-1|AAH02933.1| 365|Homo sapiens TUFT1 protein protein.
Length = 365
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLL 358
PE A M S ++LA +L ES G + + +G S DK+I+ K + L
Sbjct: 15 PEDQAAAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQL 74
Query: 359 PSEV--LAEDDPTLQKPDED 412
SEV + E LQK ED
Sbjct: 75 KSEVQYIQEARNCLQKLRED 94
>AY358610-1|AAQ88973.1| 199|Homo sapiens TUFT1 protein.
Length = 199
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLL 358
PE A M S ++LA +L ES G + + +G S DK+I+ K + L
Sbjct: 15 PEDQAAAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQL 74
Query: 359 PSEV--LAEDDPTLQKPDED 412
SEV + E LQK ED
Sbjct: 75 KSEVQYIQEARNCLQKLRED 94
>AL365436-6|CAI16592.1| 365|Homo sapiens tuftelin 1 protein.
Length = 365
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLL 358
PE A M S ++LA +L ES G + + +G S DK+I+ K + L
Sbjct: 15 PEDQAAAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQL 74
Query: 359 PSEV--LAEDDPTLQKPDED 412
SEV + E LQK ED
Sbjct: 75 KSEVQYIQEARNCLQKLRED 94
>AK075001-1|BAC11346.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ90520 fis, clone NT2RP3004640, highly similar to
Bos taurus tuftelin mRNA. ).
Length = 365
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLL 358
PE A M S ++LA +L ES G + + +G S DK+I+ K + L
Sbjct: 15 PEDQAAAGRKTYAMVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQL 74
Query: 359 PSEV--LAEDDPTLQKPDED 412
SEV + E LQK ED
Sbjct: 75 KSEVQYIQEARNCLQKLRED 94
>BC008301-1|AAH08301.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 7.3
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 MRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLLPSEV--LAEDDPT 391
M S ++LA +L ES G + + +G S DK+I+ K + L SEV + E
Sbjct: 53 MVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNC 112
Query: 392 LQKPDED 412
LQK ED
Sbjct: 113 LQKLRED 119
>AL365436-5|CAI16591.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 7.3
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 MRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLLPSEV--LAEDDPT 391
M S ++LA +L ES G + + +G S DK+I+ K + L SEV + E
Sbjct: 53 MVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNC 112
Query: 392 LQKPDED 412
LQK ED
Sbjct: 113 LQKLRED 119
>AK223161-1|BAD96881.1| 390|Homo sapiens tuftelin 1 variant
protein.
Length = 390
Score = 29.9 bits (64), Expect = 7.3
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 MRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLLPSEV--LAEDDPT 391
M S ++LA +L ES G + + +G S DK+I+ K + L SEV + E
Sbjct: 53 MVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNC 112
Query: 392 LQKPDED 412
LQK ED
Sbjct: 113 LQKLRED 119
>AF254860-1|AAF78914.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 7.3
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 MRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLLPSEV--LAEDDPT 391
M S ++LA +L ES G + + +G S DK+I+ K + L SEV + E
Sbjct: 53 MVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNC 112
Query: 392 LQKPDED 412
LQK ED
Sbjct: 113 LQKLRED 119
>AF254260-1|AAF78913.1| 390|Homo sapiens tuftelin 1 protein.
Length = 390
Score = 29.9 bits (64), Expect = 7.3
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 MRGKESTSNALAVQLDES--GRVKYSAIARQGHSADKIIYSKLTDLLPSEV--LAEDDPT 391
M S ++LA +L ES G + + +G S DK+I+ K + L SEV + E
Sbjct: 53 MVSSHSAGHSLASELVESHDGHEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNC 112
Query: 392 LQKPDED 412
LQK ED
Sbjct: 113 LQKLRED 119
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 224 FPYQAGTVPHGSLGMLRHLQNLRLFEVPILSSHRKVAHWSG 102
FP + +G L M H Q++R+ + P SH + W+G
Sbjct: 974 FPILMNIISNGLLQMFNHTQHIRISQAPFPLSH--IGLWTG 1012
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 29.5 bits (63), Expect = 9.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 224 FPYQAGTVPHGSLGMLRHLQNLRLFEVPILSSHRKVAHWSG 102
FP + +G L M H Q++R+ + P SH + W+G
Sbjct: 974 FPILMNIISNGLLQMFNHTQHIRISQAPFPLSH--IGLWTG 1012
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,617,903
Number of Sequences: 237096
Number of extensions: 2265741
Number of successful extensions: 5600
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5589
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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