Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0859
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 173 8e-44
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 0.64
AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai... 30 1.5
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 29 3.4
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 29 3.4
AC087078-2|AAG37940.1| 121|Caenorhabditis elegans Hypothetical ... 29 3.4
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 28 4.5
Z81109-3|CAB03246.1| 318|Caenorhabditis elegans Hypothetical pr... 28 6.0
U97189-7|AAK68257.3| 782|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 27 7.9
U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily as... 27 7.9
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 27 7.9
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 173 bits (421), Expect = 8e-44
Identities = 90/177 (50%), Positives = 121/177 (68%), Gaps = 3/177 (1%)
Frame = +2
Query: 86 SALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPLGMG---MRGKESTSNAL 256
SA +VS+ PPYG+R + PR EDF DGGAFPEIHVAQ+PLG+G MRGK N L
Sbjct: 36 SAALVSKEP-PPYGKRTSFRPRGPEDFGDGGAFPEIHVAQFPLGLGLGDMRGKPE--NTL 92
Query: 257 AVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDITEK 436
A+Q G++++ AIAR GH DK++YSKL D+ ++ EDD +QKPD+D + D TEK
Sbjct: 93 ALQYGTDGKLQHDAIARIGHVKDKVVYSKLNDM-KAKTWNEDDDDIQKPDDDAVIDATEK 151
Query: 437 TKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQGGSYNSGAKQRVIRMVEAQ 607
T++ALEK+ N+K++ QYIRYTP+QQ G+ +G++QR+IRMVE Q
Sbjct: 152 TRMALEKIVNSKVASALPVRHADKLAPAQYIRYTPSQQNGA--AGSQQRIIRMVEEQ 206
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 311 LVWQSQNI*LSQTHPAGQQERLKYSPCLAFPYQAGTVPHG 192
L WQ Q Q H QQ+ P +PY G VP G
Sbjct: 782 LAWQQQRYHQQQQHQQQQQQGAPGGPRPPYPYPGGPVPPG 821
>AC025715-8|AAK68439.2| 531|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 5 protein.
Length = 531
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 272 ESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDD 415
E+G++++S I G D+ + K+ P DD QK D+DD
Sbjct: 474 ETGKLQFSQIRVAGDEDDENLLDKIPSPSPFFTERSDDLRTQKEDDDD 521
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 323 DKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDITEKTKLALE 454
D I SKL +LL E L E + + D ++ EK KLAL+
Sbjct: 492 DPEIQSKLENLLREEELLEQAGEYESDLDSDDEETKEKLKLALQ 535
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 323 DKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDITEKTKLALE 454
D I SKL +LL E L E + + D ++ EK KLAL+
Sbjct: 492 DPEIQSKLENLLREEELLEQAGEYESDLDSDDEETKEKLKLALQ 535
>AC087078-2|AAG37940.1| 121|Caenorhabditis elegans Hypothetical
protein Y34F4.3 protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 99 CPRPVCHLTVRGKDGYLEETKILQMAEHSQRSMWHSTRLVWECEAR 236
C P+C D LE+ +LQM E + M HS + +C R
Sbjct: 58 CKYPMCIADPFKTDHNLEQGVVLQMFEFIRSCMEHSMEVFTDCRIR 103
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 496 SCTQSCACSIYSVHSSATRW 555
SC Q C +YSV SA+RW
Sbjct: 654 SCKQPCNQDVYSVSYSASRW 673
>Z81109-3|CAB03246.1| 318|Caenorhabditis elegans Hypothetical
protein R10D12.5 protein.
Length = 318
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 237 RVLQTLLLSSWMSLGESNILRLPDK 311
+ + L LS WM LG+ N+LR+ K
Sbjct: 201 QAILNLRLSGWMGLGKINVLRMDGK 225
>U97189-7|AAK68257.3| 782|Caenorhabditis elegans Hypothetical
protein C48B6.8 protein.
Length = 782
Score = 27.9 bits (59), Expect = 6.0
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 99 CPRPVCHLTVRGKDGYLEETKILQMAEHSQRSMWHSTRLVWECEARRVLQTLLLSSWMSL 278
C R V G + + + MA RS+ + +LVW C A+ LL+ S+
Sbjct: 249 CRRHVSAFNATGSVVWQIRLEAVGMAMCLYRSLLINNKLVWNCNAQMSPVALLVCSYNKS 308
Query: 279 GESNI-LRLPD 308
E+ I + PD
Sbjct: 309 YENTITMMAPD 319
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +2
Query: 410 DDIQDITEKTKLALEKLTNAK------ISXXXXXXXXXXXXXXQYIRYTPAQQGGSYN 565
++++D K K ALEKLT A IS ++I Y PAQQ G +N
Sbjct: 149 EEVED-DRKVKQALEKLTGALFQRPPLISAVKRQLRIRTVYENKFIEYDPAQQMGIFN 205
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2
Query: 185 PEIHVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPS 364
PE H +Q + + + L ++LD+ G V+ I + S + S+ ++ +
Sbjct: 689 PEFHESQIRIKKTTKSCRKLIDQLNIELDQLGFVRLGDILIKAESEQTLTRSE--EIQET 746
Query: 365 EVL-AEDDPTLQ---KPDEDDIQDITEKTKLALEK 457
+V+ AE P + KP++D I +T+K + +K
Sbjct: 747 QVVSAESSPNKEQFPKPEQDSI--LTKKMERIFKK 779
>U80450-10|AAB37834.1| 417|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform b protein.
Length = 417
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +2
Query: 236 ESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDD 415
+++++A QL + R ++A S+D + DL+ + + T+++ D+DD
Sbjct: 22 DASASATTAQLQQRSRYCDVSLASSEESSDLSDAEEKDDLIRRTITSSSKDTMEEGDDDD 81
Query: 416 IQDITE 433
++ +
Sbjct: 82 EEEFDD 87
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/66 (19%), Positives = 33/66 (50%)
Frame = +2
Query: 236 ESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDD 415
+++++A QL + R ++A S+D + DL+ + + T+++ D+DD
Sbjct: 717 DASASATTAQLQQRSRYCDVSLASSEESSDLSDAEEKDDLIRRTITSSSKDTMEEGDDDD 776
Query: 416 IQDITE 433
++ +
Sbjct: 777 EEEFDD 782
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,109,550
Number of Sequences: 27780
Number of extensions: 337896
Number of successful extensions: 1219
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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