Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0859
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77180.1 68414.m08991 chromatin protein family contains Pfam ... 139 2e-33
At4g01220.2 68417.m00161 expressed protein 32 0.34
At4g01220.1 68417.m00160 expressed protein 32 0.34
At3g27100.1 68416.m03390 expressed protein 31 0.79
At4g01750.1 68417.m00227 expressed protein T15B16.8 30 1.0
At1g36730.1 68414.m04569 eukaryotic translation initiation facto... 30 1.0
At3g07770.1 68416.m00947 heat shock protein-related strong simil... 30 1.4
At4g23515.1 68417.m03389 Toll-Interleukin-Resistance (TIR) domai... 29 2.4
At4g01770.1 68417.m00231 hypothetical protein similar to T15B16.9 29 2.4
At5g62240.1 68418.m07815 expressed protein various predicted pro... 28 4.2
At2g41410.1 68415.m05110 calmodulin, putative identical to SP|P3... 28 4.2
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 28 5.6
At3g59190.1 68416.m06599 F-box family protein contains F-box dom... 28 5.6
At5g38037.1 68418.m04583 hypothetical protein 27 7.4
At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) simil... 27 9.7
At1g19490.1 68414.m02428 bZIP transcription factor family protei... 27 9.7
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 27 9.7
>At1g77180.1 68414.m08991 chromatin protein family contains Pfam
domain, PF02731: SKIP/SNW domain found in chromatin
proteins.
Length = 613
Score = 139 bits (336), Expect = 2e-33
Identities = 75/194 (38%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Frame = +2
Query: 35 SQQVWDRDDELKAKRVGSALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPL 214
S W ++ +++ V S+ + + VP Y R+G P+ EDF DGGAFPEIH+ QYPL
Sbjct: 21 SNDAWFKNRVTESETVKSSSIKFKV-VPAYLNRQGLRPKNPEDFGDGGAFPEIHLPQYPL 79
Query: 215 GMGM-RGKESTSNALAVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDD-P 388
MG + + + L V +D G V + AI RQ ++ KI+YS+ D++P + E D
Sbjct: 80 LMGKNKSNKPGAKTLPVTVDAQGNVVFDAIVRQNENSRKIVYSQHKDIIPKFLKNEGDLG 139
Query: 389 TLQKPDED---DIQDITEKTKLALEKLTNAKISXXXXXXXXXXXXXXQYIRYTPAQQGGS 559
T+ +E+ +IQ+ E+TK A+EK+ N ++S QYI+Y P+QQ +
Sbjct: 140 TVVDEEEELQKEIQETAEETKAAIEKIVNVRLSAAQPSNIARQSGDSQYIKYKPSQQSSA 199
Query: 560 YNSGAKQRVIRMVE 601
+NSGAK+R+IRMVE
Sbjct: 200 FNSGAKERIIRMVE 213
>At4g01220.2 68417.m00161 expressed protein
Length = 299
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 409 GRHSRYHRED*TRTREIDQCQNISGDASESCTQSCACSIYSVHSSATRWLL*LWSETASY 588
G+H Y +D T + +D ++ + T C+C I+ ++ + L+ W E
Sbjct: 206 GKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLLMKKWIEELET 265
Query: 589 Q 591
Q
Sbjct: 266 Q 266
>At4g01220.1 68417.m00160 expressed protein
Length = 360
Score = 31.9 bits (69), Expect = 0.34
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 409 GRHSRYHRED*TRTREIDQCQNISGDASESCTQSCACSIYSVHSSATRWLL*LWSETASY 588
G+H Y +D T + +D ++ + T C+C I+ ++ + L+ W E
Sbjct: 206 GKHDAYFMDDMTAIKPLDHSHDLPPPGKKGRTYICSCMIFLRPTNGAKLLMKKWIEELET 265
Query: 589 Q 591
Q
Sbjct: 266 Q 266
>At3g27100.1 68416.m03390 expressed protein
Length = 115
Score = 30.7 bits (66), Expect = 0.79
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 401 PDEDDIQDITEKTKLALEKLTNAKI 475
PDEDD+ D EK K+ L ++ N K+
Sbjct: 11 PDEDDVADGFEKDKVTLREIINVKL 35
>At4g01750.1 68417.m00227 expressed protein T15B16.8
Length = 367
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +1
Query: 409 GRHSRYHRED*TRTREIDQCQNISGDASESCTQSCACSIYSVHSSATRWLL*LWSETASY 588
G H Y +D + + ++ ++ T C+C IY ++ + L+ WSE
Sbjct: 211 GSHDAYFTDDMPQIKPLNHSHDLPAPDQNGETYICSCMIYLRPTNGAKLLMKKWSEELQS 270
Query: 589 Q 591
Q
Sbjct: 271 Q 271
>At1g36730.1 68414.m04569 eukaryotic translation initiation factor
5, putative / eIF-5, putative similar to SP|P55876
Eukaryotic translation initiation factor 5 (eIF-5) {Zea
mays}; contains Pfam profiles PF02020:
eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in
IF2B/IF5
Length = 439
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 302 ARQGHSADKIIYSKLTDLLPSEVLA-EDDPTLQKPDEDDIQDITEKTKLALEKLTNAKIS 478
A G S DK+ SK D P L+ E+D + D+DD+Q T+ ++ A EK ++S
Sbjct: 191 ATTGTSKDKV--SKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAAEKRMKEQLS 248
>At3g07770.1 68416.m00947 heat shock protein-related strong
similarity to heat-shock protein [Secale cereale]
GI:556673; contains Pfam profiles PF02518: ATPase,
histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein, PF00183: Hsp90 protein
Length = 803
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 365 EVLAEDDPT-LQKPDEDDIQDITEKTKLALEK 457
EV EDDPT +K D+DD + +KTK +E+
Sbjct: 314 EVEVEDDPTETKKDDQDDQTEKKKKTKKVVER 345
>At4g23515.1 68417.m03389 Toll-Interleukin-Resistance (TIR)
domain-containing protein contains Pfam profile PF01582:
TIR domain
Length = 331
Score = 29.1 bits (62), Expect = 2.4
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 516 LLNIFGTLQRNKVALITLERNSELSGW 596
L N+FG ++++++A++ +N SGW
Sbjct: 50 LQNLFGHIRKSRIAIVIFSKNYAESGW 76
>At4g01770.1 68417.m00231 hypothetical protein similar to T15B16.9
Length = 361
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +1
Query: 409 GRHSRYHRED*TRTREIDQCQNISGDASESCTQSCACSIYSVHSSATRWLL*LWSETASY 588
G H Y +D + + ++ ++ T C+C IY ++ + L+ WSE
Sbjct: 205 GSHDAYFTDDMPQIKPLNHSHDLPHPDRNGETYICSCMIYLRPTNGAKLLMKKWSEELQS 264
Query: 589 Q 591
Q
Sbjct: 265 Q 265
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 194 HVAQYPLGMGMRGKESTSNALAVQLDESGRVKYSAIARQGHSADKI---IYSKLTDLLPS 364
H + L +R KE +SNA + E+ K I ++ HS KI +Y + L
Sbjct: 260 HFQAFRLRTSLRAKERSSNAKTDVVQENDATKSRTIVKENHSR-KINCQVYESKSSPLDP 318
Query: 365 EVLAEDD 385
++ +++D
Sbjct: 319 KISSKED 325
>At2g41410.1 68415.m05110 calmodulin, putative identical to
SP|P30188 Calmodulin-like protein {Arabidopsis thaliana}
Length = 216
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
Frame = +2
Query: 50 DRDDELKAKRVGSALVVSQTSVPPYGERKGWVPRRDEDFADGGAFPEIHVAQYPLGMGMR 229
DRDD+ R A ++S+ S P + + + R+ D DGG +A G
Sbjct: 79 DRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLEDLASRVAGTSGE 138
Query: 230 GKESTSNALAV----QLDESGRVKYSAIAR 307
G T V +D +G++ + R
Sbjct: 139 GSVETEELREVFEIFDVDRNGKISAEELHR 168
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -3
Query: 282 LPDSSSWTARAFEVLS-LPRIPIPSGYCATWISGNAPPSAKSSSLRGTHPFLSP*GGTLV 106
L +S ++ A EVL ++P+ +++ ++SSS R + F GG +V
Sbjct: 475 LINSIQYSDLANEVLKGRGKVPVADYKVVQYVNDKTEDLSQSSSKRSCYSFCMCPGGQVV 534
Query: 105 WDTTRALPTRLAFNSSSLS 49
+T PT L N S S
Sbjct: 535 LTSTN--PTELCINGMSFS 551
>At3g59190.1 68416.m06599 F-box family protein contains F-box domain
Pfam:PF00646
Length = 388
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 375 PKMTQHCRNQTRTTFKISPRRLNSHSRN*PMPKYQRRCQ 491
PKM + R + R +FK+ R+ + N P+ K+ RC+
Sbjct: 64 PKMGRRKRLELRKSFKLFVDRVMALQGNAPLKKFSLRCK 102
>At5g38037.1 68418.m04583 hypothetical protein
Length = 226
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 523 LSRRSFGCSFHWHRR*YFGIGQFLECEFSLLGDILNVVLVWF 398
L+R+S S W + F QF+ C F G IL ++L WF
Sbjct: 183 LARKS-RVSVFWWKNYEFTFSQFIVCIFKKFGKIL-ILLDWF 222
>At1g66120.1 68414.m07504 acyl-activating enzyme 11 (AAE11) similar
to AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
cDNA acyl-activating enzyme 11 (At1g66120) GI:29893230,
acyl-activating enzyme 11 [Arabidopsis thaliana]
GI:29893231
Length = 572
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 314 HSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDITEK 436
+S KI+ SKL D+ + V+ EDD +K + I+ ++ +
Sbjct: 531 NSNGKILKSKLRDIAKALVVREDDAGSKKVHQRSIEHVSSR 571
>At1g19490.1 68414.m02428 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
Length = 471
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 257 AVQLDESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDDIQDIT-E 433
A G+ + + +D ++ +D LP+ LAE+ ++ +E++++ IT E
Sbjct: 54 AASWGSKGKRVRKRVKTESPPSDSLLKPPDSDTLPTPDLAEERLVKEEEEEEEVEPITKE 113
Query: 434 KTKLALEKLTNAK 472
TK ++ N +
Sbjct: 114 LTKAPVKSEINGE 126
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 269 DESGRVKYSAIARQGHSADKIIYSKLTDLLPSEVLAEDDPTLQKPDEDD 415
D++ RV + HS+ +I+ S L LL E + +DD + + D+D+
Sbjct: 217 DKNERVAIAICEACFHSSPRIMISALRFLLDYENIDDDDDSDAESDDDE 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,472,981
Number of Sequences: 28952
Number of extensions: 323190
Number of successful extensions: 1043
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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