Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0858
(323 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 106 1e-22
UniRef50_Q8IS66 Cluster: RNA-directed DNA polymerase; n=1; Eupry... 40 0.011
UniRef50_UPI0000587485 Cluster: PREDICTED: similar to endonuclea... 38 0.032
UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: Re... 36 0.13
UniRef50_UPI0000F1FBF1 Cluster: PREDICTED: similar to ReO_6; n=1... 35 0.30
UniRef50_UPI0000E495D6 Cluster: PREDICTED: hypothetical protein;... 35 0.40
UniRef50_A7T3E1 Cluster: Predicted protein; n=2; Nematostella ve... 34 0.53
UniRef50_UPI0000E48803 Cluster: PREDICTED: similar to endonuclea... 34 0.70
UniRef50_Q00XM4 Cluster: Aldo/keto reductase family proteins; n=... 33 0.92
UniRef50_Q5TTM1 Cluster: ENSANGP00000026284; n=1; Anopheles gamb... 33 0.92
UniRef50_UPI0000DD8346 Cluster: PREDICTED: hypothetical protein;... 33 1.2
UniRef50_Q9U997 Cluster: Reverse transcriptase; n=1; Anopheles m... 33 1.6
UniRef50_UPI0000F1EAD1 Cluster: PREDICTED: similar to ReO_6, par... 32 2.1
UniRef50_Q7RZS2 Cluster: Putative uncharacterized protein NCU002... 32 2.1
UniRef50_Q3A7A9 Cluster: Putative cobalt-precorrin-6A synthase [... 32 2.1
UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to endonuclea... 32 2.8
UniRef50_UPI0000F33BC8 Cluster: UPI0000F33BC8 related cluster; n... 31 3.7
UniRef50_A4YWN7 Cluster: Ethanolamine ammonia-lyase light chain;... 31 3.7
UniRef50_Q0UF35 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_UPI0001556217 Cluster: PREDICTED: similar to RET finger... 31 4.9
UniRef50_Q84NR1 Cluster: Putative uncharacterized protein P0034A... 31 4.9
UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein... 31 4.9
UniRef50_Q5DAQ8 Cluster: SJCHGC01690 protein; n=3; Schistosoma j... 31 4.9
UniRef50_UPI0000F21E36 Cluster: PREDICTED: similar to ReO_6; n=1... 31 6.5
UniRef50_UPI0000E499E6 Cluster: PREDICTED: similar to ReO_6; n=1... 31 6.5
UniRef50_UPI00006C0132 Cluster: PREDICTED: similar to myosin XV;... 31 6.5
UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6... 31 6.5
UniRef50_A5KBW4 Cluster: Helicase, putative; n=1; Plasmodium viv... 31 6.5
UniRef50_UPI0000DB7031 Cluster: PREDICTED: similar to CG15831-PA... 30 8.6
UniRef50_UPI0000585167 Cluster: PREDICTED: similar to endonuclea... 30 8.6
UniRef50_Q789D2 Cluster: Reverse transcriptase; n=26; Tetrapoda|... 30 8.6
UniRef50_Q30NU3 Cluster: ABC transporter-related protein; n=1; T... 30 8.6
UniRef50_Q108V0 Cluster: Expressed protein; n=5; Magnoliophyta|R... 30 8.6
UniRef50_Q4XNY6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_O45277 Cluster: Putative uncharacterized protein; n=2; ... 30 8.6
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse
transcriptase-like protein; n=25; Arthropoda|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 986
Score = 106 bits (254), Expect = 1e-22
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 45 LRKSNDSLAHSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSMPEIRITQRAVRQEL 224
LRKS+DSLAHSAKEKADLLVKLFAS ST+DDGGATPPNI RCDSS+PEI TQ AVR+EL
Sbjct: 410 LRKSDDSLAHSAKEKADLLVKLFASNSTVDDGGATPPNILRCDSSLPEICFTQCAVRREL 469
Query: 225 R 227
R
Sbjct: 470 R 470
Score = 61.7 bits (143), Expect = 3e-09
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1
Query: 178 PCLRFASHSVRSDRSFGFLDVHKSSGPDCIPAVVLKTCAPELTPALTR 321
P + F +VR R LDVHKSSG D IPAVVLKTCAPELTPALTR
Sbjct: 456 PEICFTQCAVR--RELRLLDVHKSSGRDGIPAVVLKTCAPELTPALTR 501
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 8 AEGNFCRSSLPP 43
AEGNFCRSSLPP
Sbjct: 398 AEGNFCRSSLPP 409
>UniRef50_Q8IS66 Cluster: RNA-directed DNA polymerase; n=1; Euprymna
scolopes|Rep: RNA-directed DNA polymerase - Euprymna
scolopes
Length = 202
Score = 39.9 bits (89), Expect = 0.011
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPALTR 321
LD K+ GPD IPAV+LK C+ E+ P L++
Sbjct: 24 LDTSKACGPDLIPAVLLKKCSAEVAPVLSK 53
>UniRef50_UPI0000587485 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 766
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/29 (55%), Positives = 23/29 (79%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPALT 318
L VHK++GPD +P+ +L++ A ELTP LT
Sbjct: 283 LQVHKATGPDELPSRLLRSLAKELTPVLT 311
>UniRef50_Q8UUM3 Cluster: ReO_6 protein; n=3; Percomorpha|Rep: ReO_6
protein - Oryzias latipes (Medaka fish) (Japanese
ricefish)
Length = 971
Score = 36.3 bits (80), Expect = 0.13
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 103 SSSLPHTRLWMTEE-PRRPTSPG-VTAPCLRFASHSVRSDRSFGFLDVHKSSGPDCIPAV 276
+S P + +T++ P PTSP + L VR + F + K+ GPD +
Sbjct: 483 TSPSPSATISITQDLPAIPTSPTPAPSSALTICERDVR--QQFQKQKIRKAPGPDGVSPS 540
Query: 277 VLKTCAPELTPALTR 321
LK CA +L P TR
Sbjct: 541 CLKVCADQLAPIFTR 555
>UniRef50_UPI0000F1FBF1 Cluster: PREDICTED: similar to ReO_6; n=1;
Danio rerio|Rep: PREDICTED: similar to ReO_6 - Danio
rerio
Length = 878
Score = 35.1 bits (77), Expect = 0.30
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 244 KSSGPDCIPAVVLKTCAPELTPALT 318
K++GPDCIP VLK CA +L T
Sbjct: 457 KAAGPDCIPGRVLKVCAEQLAGVFT 481
>UniRef50_UPI0000E495D6 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 340
Score = 34.7 bits (76), Expect = 0.40
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPALT 318
LDV ++ GPD IPA +LK A ELTP T
Sbjct: 54 LDVLQAMGPDQIPARLLKGLATELTPVFT 82
>UniRef50_A7T3E1 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 127
Score = 34.3 bits (75), Expect = 0.53
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPAL 315
+D K+ G D IP+ VLK CA EL P+L
Sbjct: 18 VDPRKARGTDNIPSAVLKICADELAPSL 45
>UniRef50_UPI0000E48803 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 310
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPALT 318
L VHK++GPD +P+ +L+ C +LTP LT
Sbjct: 29 LQVHKATGPDELPSRLLR-CLAKLTPVLT 56
>UniRef50_Q00XM4 Cluster: Aldo/keto reductase family proteins; n=2;
Ostreococcus|Rep: Aldo/keto reductase family proteins -
Ostreococcus tauri
Length = 336
Score = 33.5 bits (73), Expect = 0.92
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 73 IVRRRRLTFWSSSLPHTRLWMTEEPRRPTSPGVTAPCLRFASHSVRSD 216
+V R R ++ P TR+ T + R +PG+T P L F ++ +R +
Sbjct: 28 VVERYRAAQFTFYAPQTRVMSTTKWTRAIAPGITMPMLAFGTYRLRGE 75
>UniRef50_Q5TTM1 Cluster: ENSANGP00000026284; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000026284 - Anopheles gambiae
str. PEST
Length = 763
Score = 33.5 bits (73), Expect = 0.92
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 253 GPDCIPAVVLKTCAPELTPALTR 321
GPD IPAV+LK CA L P+L +
Sbjct: 356 GPDGIPAVILKWCASALAPSLMK 378
>UniRef50_UPI0000DD8346 Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 116
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = -1
Query: 308 GVNSGAHVFRTTAGMQSGPLDLWTSRKPKLLSDRT-----LCDANLRHGAVTPGDVGRRG 144
G + + V R AG Q GP + + R+P RT L A HG TPG GRRG
Sbjct: 45 GPAAASAVPRIAAGGQQGPAEAKSRRRPHSSWSRTPDPPSLTSALAAHG--TPGTRGRRG 102
Query: 143 SS 138
SS
Sbjct: 103 SS 104
>UniRef50_Q9U997 Cluster: Reverse transcriptase; n=1; Anopheles
merus|Rep: Reverse transcriptase - Anopheles merus
(Mosquito)
Length = 329
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 247 SSGPDCIPAVVLKTCAPELTPALTR 321
SSGPD IPA +LK C L P L +
Sbjct: 109 SSGPDNIPAYILKHCRQSLAPILAK 133
>UniRef50_UPI0000F1EAD1 Cluster: PREDICTED: similar to ReO_6,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
ReO_6, partial - Danio rerio
Length = 534
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 157 TSPGVTAPCLR-FASHSVRSDRSFGFLDVHKSSGPDCIPAVVLKTCAPELTPALT 318
T+P T + F H VRS + ++++K++GPD + LK+CA +L T
Sbjct: 311 TAPSPTEETIPVFECHQVRS--TLRRININKAAGPDKVSGRTLKSCADQLAGVFT 363
>UniRef50_Q7RZS2 Cluster: Putative uncharacterized protein
NCU00292.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU00292.1 - Neurospora crassa
Length = 717
Score = 32.3 bits (70), Expect = 2.1
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 37 STXCVSPMTVWLIVRRRRLTFWSSSLPHTRLWMTEEPRRPTSPGV--TAPCLRFASHSVR 210
ST + +LI R RR SSSL T LW+ P+ P+ P V +P R + VR
Sbjct: 89 STSSIKSNLDYLIYRSRR----SSSLGTTTLWIAPSPKNPSVPRVIDLSPSGRISVSEVR 144
Query: 211 SDR 219
S +
Sbjct: 145 SGK 147
>UniRef50_Q3A7A9 Cluster: Putative cobalt-precorrin-6A synthase
[deacetylating]; n=2; Desulfuromonadales|Rep: Putative
cobalt-precorrin-6A synthase [deacetylating] -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 350
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 308 GVNSGAHVFRTTAGMQSGPLDLWTSRKPKLLSDRTLCDANLRHGAVTPGDVGRRGS 141
G+ G V TT ++ P L RK S C + +RH + PG +G R +
Sbjct: 156 GIKGGISVLGTTGRVR--PFSLEAVRKTMECSYNVACASGVRHPVLVPGHIGERAA 209
>UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 597
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 226 GFLDVHKSSGPDCIPAVVLKTCAPELTPALT 318
G V K+ GPD IP ++LK E+ P LT
Sbjct: 367 GSTKVKKAHGPDEIPNIILKEAKDEIAPVLT 397
>UniRef50_UPI0000F33BC8 Cluster: UPI0000F33BC8 related cluster; n=1;
Bos taurus|Rep: UPI0000F33BC8 UniRef100 entry - Bos
Taurus
Length = 194
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = -3
Query: 264 AIWPTRLMDIKKTEAPV*PHAV*CESQAWSCHTGRCWAAWLLRHPKSSMRQRA*PEGQPS 85
A+ P L ++AP+ P V C G C + HP+S + Q P G PS
Sbjct: 48 ALPPATLRAAPLSQAPLGPRCVSLPPAHRPCRPGPCPSLPSPPHPRSVLGQPMSPYGPPS 107
Query: 84 PS 79
PS
Sbjct: 108 PS 109
>UniRef50_A4YWN7 Cluster: Ethanolamine ammonia-lyase light chain;
n=1; Bradyrhizobium sp. ORS278|Rep: Ethanolamine
ammonia-lyase light chain - Bradyrhizobium sp. (strain
ORS278)
Length = 262
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 242 WTSRKPKLLSDRTLCDANLRHGAVTPGDVGRRGSSVI 132
W R+ ++ S+R C +N+RHG + P D ++ + +I
Sbjct: 200 WMPRRGRVDSERN-CISNVRHGGLAPDDAAKQSAELI 235
>UniRef50_Q0UF35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 797
Score = 31.5 bits (68), Expect = 3.7
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +1
Query: 94 TFWSSSLPHTRLWMTEEPRRPTSPGVTAPCLRFASHSVRSDRSFGFLDVHKSSGPDCIPA 273
T SS+ P +R W++ R TSPG A LR DR L + D +PA
Sbjct: 35 TSTSSAGPASRGWLSSVRRPRTSPGPKASALRRTQLCEDDDRRDSALAPSNCTATDELPA 94
Query: 274 VVLKTCAPELTPAL 315
+ P L PA+
Sbjct: 95 LTSLRKTPSL-PAI 107
>UniRef50_UPI0001556217 Cluster: PREDICTED: similar to RET finger
protein-like 3, partial; n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to RET finger
protein-like 3, partial - Ornithorhynchus anatinus
Length = 308
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 67 WLIVRRRRLTFWSSSLPHTRLWMTEEPRR 153
W I R R FW+S+ P T L++ E P R
Sbjct: 190 WAICLRERHHFWASTSPQTPLYLRECPNR 218
>UniRef50_Q84NR1 Cluster: Putative uncharacterized protein
P0034A04.110; n=3; Oryza sativa|Rep: Putative
uncharacterized protein P0034A04.110 - Oryza sativa
subsp. japonica (Rice)
Length = 847
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 72 HSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSMPEI 191
H AK+ LL++ ++ D + P S+C SMPE+
Sbjct: 174 HMAKQPPKLLLETKPTFQCSDSDNSRPQKASQCSDSMPEM 213
>UniRef50_Q9GUI3 Cluster: Nuclear hormone receptor family protein
114, isoform a; n=5; Caenorhabditis|Rep: Nuclear hormone
receptor family protein 114, isoform a - Caenorhabditis
elegans
Length = 418
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +3
Query: 3 RGQKVTSAGLAFHXLRKSNDSLAHSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSM 182
R +K S G+ + L+++ D + ++ + + S + D+G +TPP++S S
Sbjct: 71 RFEKCLSVGMDRNALQQNRDPIGYTKRTRRPKKELKTTSDCSSDEGASTPPSVSPLQLSP 130
Query: 183 PEI 191
P I
Sbjct: 131 PPI 133
>UniRef50_Q5DAQ8 Cluster: SJCHGC01690 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC01690 protein - Schistosoma
japonicum (Blood fluke)
Length = 258
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 52 SPMTVWLIVRRRRLTFWSSSLPHTRLWMTEE 144
SP+ W+ +R RRL W LPH + +TEE
Sbjct: 39 SPLPKWVSLRGRRLQNW-GGLPHVKGMLTEE 68
>UniRef50_UPI0000F21E36 Cluster: PREDICTED: similar to ReO_6; n=1;
Danio rerio|Rep: PREDICTED: similar to ReO_6 - Danio
rerio
Length = 689
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 244 KSSGPDCIPAVVLKTCAPELTPALTR 321
K++GPD I VLK CA ELT T+
Sbjct: 328 KAAGPDGITGRVLKDCADELTGVFTK 353
>UniRef50_UPI0000E499E6 Cluster: PREDICTED: similar to ReO_6; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
ReO_6 - Strongylocentrotus purpuratus
Length = 472
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 193 ASHSVRSDRSFGFLDVHKSSGPDCIPAVVLKTCAPEL 303
+ H VR R FG L +K+ GPD I VLK C +L
Sbjct: 263 SEHDVR--RCFGALKTNKAPGPDGICNKVLKLCRDQL 297
>UniRef50_UPI00006C0132 Cluster: PREDICTED: similar to myosin XV;
n=1; Homo sapiens|Rep: PREDICTED: similar to myosin XV -
Homo sapiens
Length = 569
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 100 WSSSLPHTRLWMTEEPRRPTSPGVTAPCLRFASH 201
W+S L RL TE PR P G+++P A H
Sbjct: 446 WASPLLQRRLLATENPRVPPGLGISSPAAPPAGH 479
>UniRef50_Q8WS60 Cluster: Endonuclease/reverse transcriptase; n=6;
Bilateria|Rep: Endonuclease/reverse transcriptase -
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Length = 1045
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPAL 315
LD K+SGPD I VLK A EL P+L
Sbjct: 556 LDPTKASGPDQISPRVLKEVATELAPSL 583
>UniRef50_A5KBW4 Cluster: Helicase, putative; n=1; Plasmodium
vivax|Rep: Helicase, putative - Plasmodium vivax
Length = 1618
Score = 30.7 bits (66), Expect = 6.5
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 3 RGQKVTSAGLAFHXLRKSND----SLAHSAKEKADLLVKLFASYSTLDDGGATPPNISRC 170
RG K GLA L D + + KEKA LL+K+F +Y +D+G + SR
Sbjct: 789 RGTKCERRGLAKQMLESEYDICLTTFDFAIKEKA-LLIKIFWTYIVVDEGHRMKNSKSRF 847
Query: 171 DSSMPEIRITQRAV 212
+ + + QR +
Sbjct: 848 HIILKDFKSKQRVL 861
>UniRef50_UPI0000DB7031 Cluster: PREDICTED: similar to CG15831-PA.3;
n=2; Apis mellifera|Rep: PREDICTED: similar to
CG15831-PA.3 - Apis mellifera
Length = 2170
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 274 LRGCNLAHSTYGHQENRSSCLTARCV--MRISGMELSHREMLGGVAPPSSK 128
L C A S Y ++ S CL R V + I G+ L H + L G+ PP +K
Sbjct: 1962 LGDCENAVSDYDYRTISSHCLPPRLVPTLCIEGV-LQHHQSLRGMTPPEAK 2011
>UniRef50_UPI0000585167 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 737
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 232 LDVHKSSGPDCIPAVVLKTCAPELTPALT 318
L +K+SGPD I + VLK A +L+P LT
Sbjct: 537 LKANKASGPDEITSRVLKEYAEDLSPILT 565
>UniRef50_Q789D2 Cluster: Reverse transcriptase; n=26;
Tetrapoda|Rep: Reverse transcriptase - Gallus gallus
(Chicken)
Length = 712
Score = 30.3 bits (65), Expect = 8.6
Identities = 27/71 (38%), Positives = 34/71 (47%)
Frame = +1
Query: 106 SSLPHTRLWMTEEPRRPTSPGVTAPCLRFASHSVRSDRSFGFLDVHKSSGPDCIPAVVLK 285
SSL H T +P G + P LR + VR DR LD +KSSGPD + VLK
Sbjct: 187 SSLSHVPEPCTPKPPGGDQGGKSPPTLR--AEQVR-DRLMR-LDEYKSSGPDGVHPRVLK 242
Query: 286 TCAPELTPALT 318
A + L+
Sbjct: 243 ELAEVVAEPLS 253
>UniRef50_Q30NU3 Cluster: ABC transporter-related protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: ABC
transporter-related protein - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 254
Score = 30.3 bits (65), Expect = 8.6
Identities = 21/60 (35%), Positives = 25/60 (41%)
Frame = +3
Query: 18 TSAGLAFHXLRKSNDSLAHSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSMPEIRI 197
TS F L K + L H A K D+L TL G I+R +S PEI I
Sbjct: 107 TSQRKLFSPLSKEDKELVHDAMAKMDILDLAEKMVGTLSGGQRQRVMIARALASKPEILI 166
>UniRef50_Q108V0 Cluster: Expressed protein; n=5; Magnoliophyta|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 1618
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 123 STLDDGGATPPNISRCDSSMPEI 191
STLD PP+I C SSMPEI
Sbjct: 289 STLDPHMPLPPDIDLCKSSMPEI 311
>UniRef50_Q4XNY6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 640
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 36 FHXLRKSNDSLAHSAKEKADLLVKLFASYSTLDDGGATPPN 158
F + K+ND L+ +K K +K++ Y+ DD PPN
Sbjct: 477 FGLIPKNNDELSIVSKSKHLSKIKVYGKYNMTDDEMFVPPN 517
>UniRef50_O45277 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 527
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -2
Query: 283 LEPLRGCNLAHSTYGHQENRSSCLTARCVMRISGMELSHREMLGGVAPPSSKVEYEAKSL 104
L+ L C + ++ H R CL + G L H+++ V PS K ++ A +
Sbjct: 439 LQDLESCE-SECSWSHIRRREKCLGVNWIPTTRGCMLFHKQIDFNVLQPSFKAQFLANTC 497
Query: 103 T 101
T
Sbjct: 498 T 498
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,291,014
Number of Sequences: 1657284
Number of extensions: 6551787
Number of successful extensions: 19755
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19751
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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