Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0858
(323 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784... 31 0.21
11_01_0423 - 3250057-3250172,3251150-3251267 30 0.48
10_06_0134 - 11090065-11091639 30 0.48
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 28 1.5
01_06_0364 - 28749825-28750053,28750442-28750621,28751018-287511... 28 1.5
04_04_0057 + 22410167-22411330 28 1.9
12_02_1131 - 26358339-26360609 27 2.6
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 27 2.6
08_01_1022 + 10323158-10323393,10323486-10323531,10325887-103259... 27 3.4
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 27 3.4
01_07_0139 - 41385823-41386656 27 3.4
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 27 3.4
06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482 27 4.5
06_01_0618 - 4492057-4492590,4492780-4493192,4493714-4494026,449... 27 4.5
02_05_0089 - 25715637-25716333,25716481-25717238 27 4.5
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 26 5.9
07_01_1125 + 10404789-10404929,10405118-10405291,10405474-10405533 26 5.9
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103... 26 5.9
01_01_1230 - 9936226-9936706,9938145-9938200,9939145-9939233,994... 26 5.9
12_02_0984 - 25038082-25038264,25038514-25038588,25038693-250387... 26 7.8
11_06_0266 - 21791757-21792982,21793154-21793178 26 7.8
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 26 7.8
>07_03_1769 +
29377784-29377878,29377993-29378180,29378340-29378472,
29378580-29378715,29378996-29379072,29379162-29380830,
29380935-29381018,29381120-29381224,29381302-29381358
Length = 847
Score = 31.1 bits (67), Expect = 0.21
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 72 HSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSMPEI 191
H AK+ LL++ ++ D + P S+C SMPE+
Sbjct: 174 HMAKQPPKLLLETKPTFQCSDSDNSRPQKASQCSDSMPEM 213
>11_01_0423 - 3250057-3250172,3251150-3251267
Length = 77
Score = 29.9 bits (64), Expect = 0.48
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 93 QPSPSHYEPDCHWTYAXGGRLDLQKLPSAL 4
Q P +P+C W Y GG L LPS L
Sbjct: 21 QLRPQQQQPNCIWPYRLGGACILVDLPSIL 50
>10_06_0134 - 11090065-11091639
Length = 524
Score = 29.9 bits (64), Expect = 0.48
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = -2
Query: 283 LEPLRGCNLAHSTYGHQENRSSCLTARCVMRISGMELSHREMLGGVAPPSSKVEYEA 113
+ P+ G L+H +S +A CV I+ +++ RE+ + P + Y++
Sbjct: 71 ISPISGSPLSHHDSHSDHTYNSPPSASCVTEITDLQIKLRELENAILGPELDIAYDS 127
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 79 RRRRLTFWSSSLPHTRLWMTEEPRRPTSPGVTAPC 183
RR + WS S TR WM P TS +T PC
Sbjct: 198 RRASKSAWSQSSTGTRKWMQYRPAGETS--LTLPC 230
>01_06_0364 -
28749825-28750053,28750442-28750621,28751018-28751147,
28751442-28751756,28752033-28752075,28752108-28752500
Length = 429
Score = 28.3 bits (60), Expect = 1.5
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = -1
Query: 296 GAHVFRTTAGMQSGPLDLWTSRKPKLLSD-RTLCDANLRHGAVTPGDVGRRGSSVIQ--- 129
G H +R TA M + L+ + R+ L+SD + LC N H V D+G ++
Sbjct: 294 GLH-WRVTAVMLADTLERYKEREKSLISDFKKLCHNNY-HEMVGENDIGDSLVEWVERFS 351
Query: 128 SRV*GKELDQKVSLLLRTMSQTVI 57
R GK L+ +++L + QT I
Sbjct: 352 PRRFGKVLNGEIALCRQIAQQTGI 375
>04_04_0057 + 22410167-22411330
Length = 387
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 287 VFRTTAGMQSGPLDLWTSRKPKLLSDRTLCDANLRHGA--VTPGDVGRRGSS 138
V A +SG + +T R P+ + D L LRH A V D+ GSS
Sbjct: 263 VASAAAAAESGDHERFTLRLPQHVRDEVLRSLRLRHAASLVNLSDMSSEGSS 314
>12_02_1131 - 26358339-26360609
Length = 756
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 254 PLDLWTSRKPKLLSDRTLCDANLRHGAVTPGDV 156
PL+ ++RKP L+S RT+ N HG V DV
Sbjct: 467 PLESCSNRKPPLMSTRTVV-RNACHGLVLVTDV 498
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 112 LPHTRLWMTEEPRRPTSPGVT----APCLRFASHSVRSDRSF 225
L +LW EEP++P+SP T PC A ++ ++ +F
Sbjct: 129 LQSVQLWSQEEPQQPSSPSPTPTKDLPCKPVALNARKAGGAF 170
>08_01_1022 +
10323158-10323393,10323486-10323531,10325887-10325941,
10326027-10326107,10326189-10326400
Length = 209
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 88 RLTFWSSSLPHTRLWMTEEPRRPTSPGVTAPCLRFASHSV 207
RL+ W L W + P RPT+ T RF HS+
Sbjct: 96 RLSLWEEKLNRFEDW-DKAPLRPTTTVNTQAAARFIGHSL 134
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 214 LTARCVMRISGMELSHREMLGGVAPPSSKVEYEAKS 107
LT C+ +I G LSH+ + PSS V + S
Sbjct: 373 LTNECIDKIVGFALSHQLKHSTIPDPSSDVRFTLSS 408
>01_07_0139 - 41385823-41386656
Length = 277
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 100 WSSSLPHTRLWMTEEPRRPTSPGVTAPCLRFASHSVR 210
W +L TRL + ++P RP S + C H +R
Sbjct: 37 WRRALKTTRLGLLKQPNRPYSVNLELWCGSIELHPIR 73
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 190 ISGMELSHREMLGGVAPPS 134
+ GM++SH E+L G+ PPS
Sbjct: 942 VYGMDVSHLEILEGLRPPS 960
>06_01_0621 - 4511583-4512116,4512307-4512719,4513236-4513482
Length = 397
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 127 LWMTEEPRRPTSPGVTAPCLRFASHSVRSDRSFGFLDVHKS 249
+WM E+PR P G + L AS+ S +F + KS
Sbjct: 48 VWMIEQPRNPEYQGSSVRQLSTASYFAFSTLTFSHGQIIKS 88
>06_01_0618 -
4492057-4492590,4492780-4493192,4493714-4494026,
4495257-4495828,4498324-4498600
Length = 702
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 127 LWMTEEPRRPTSPGVTAPCLRFASHSVRSDRSFGFLDVHKS 249
+WM E+PR P G + L AS+ S +F + KS
Sbjct: 353 VWMIEQPRNPEYQGSSVRQLSTASYFAFSTLTFSHGQIIKS 393
>02_05_0089 - 25715637-25716333,25716481-25717238
Length = 484
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2
Query: 283 LEPLRGCNLAHSTYGHQENRSSCLTARCVMRISGMELSHREMLGGVAPPSSKV 125
L P C +A + + H R CL + + L R + +APPS+++
Sbjct: 100 LTPYYECPVATTAHKHTRTRRGCLLSLPAFPLLCSPLPARALGSCIAPPSTEM 152
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 190 ISGMELSHREMLGGVAPPSSKVE 122
ISGM S LG PPS KVE
Sbjct: 677 ISGMVASGSHELGSTGPPSLKVE 699
>07_01_1125 + 10404789-10404929,10405118-10405291,10405474-10405533
Length = 124
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +1
Query: 181 CLRFASHSVRSDRSFGFLDVHKSSGPDCIPAVVLKTCAPELT 306
C+R +S +R+ R+ G+ ++S+ P C + ++ P L+
Sbjct: 36 CVRISSPRLRASRNSGYSVANESANPGCPLSQMIAISCPCLS 77
>05_03_0389 -
13409848-13409964,13410049-13410114,13410209-13410325,
13410822-13410893,13410979-13411258,13411528-13411730,
13412230-13412316,13412705-13412758,13413042-13413221,
13414402-13414576,13414628-13414918,13414923-13415344
Length = 687
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 72 HSAKEKADLLVKLFASYSTLDDGGATPPNISRCDSSMPEIR 194
H+ KE L KL LDD PN + P+IR
Sbjct: 211 HTVKETKMLAAKLDLLMKKLDDQEKNNPNTGHSGNDCPDIR 251
>01_01_1230 -
9936226-9936706,9938145-9938200,9939145-9939233,
9940820-9940923,9943756-9943931,9945130-9945713,
9947441-9947513
Length = 520
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 281 RTTAGMQSGPLDLWTSRKPKLLSDRT 204
R T GM +GP+ L RK L SD+T
Sbjct: 324 RGTRGMWAGPISLGGCRKLLLYSDQT 349
>12_02_0984 -
25038082-25038264,25038514-25038588,25038693-25038725,
25038753-25038869,25039322-25039402,25040389-25040700
Length = 266
Score = 25.8 bits (54), Expect = 7.8
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +1
Query: 124 RLWMTEEPRR-PTSPGVTAPCLRFASHSVRSDRSFGFLD-------VHKSSGPDCIPAV 276
R +T++PR+ P + AP S+RS R+FG LD H GP +P +
Sbjct: 30 RFALTDQPRQLPLGYAIDAP-------SIRSARTFGLLDEYARVHAQHARGGPGAVPDI 81
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 96 LLVKLFASYSTLDDGGATPPNISRCDSSMPEIR 194
L LFA T DD G + RC + +P+++
Sbjct: 244 LTTNLFAFEITEDDCGMMVSRVERCVTELPQVK 276
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 233 RKPKLLSDRTLCDANLRHGAVTPGDV 156
R P+ +SD L DA+ RH AV V
Sbjct: 540 RSPEAISDAELDDASSRHAAVLDAKV 565
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,827,458
Number of Sequences: 37544
Number of extensions: 199359
Number of successful extensions: 617
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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