Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0857
         (578 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family...    29   1.7  
At5g35690.1 68418.m04267 expressed protein                             29   3.0  
At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein con...    29   3.0  
At1g75290.1 68414.m08746 isoflavone reductase, putative similar ...    29   3.0  
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina...    28   5.2  
At5g18840.1 68418.m02239 sugar transporter, putative similar to ...    27   6.8  
At4g28050.1 68417.m04024 senescence-associated protein, putative...    27   6.8  

>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 589

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 294 MKAHFIVHDKFEETKYEVFSPEELWKQFLHVRLNTVLPL 410
           +K   I  DK + TKY + S E+LWK  + V  +  +PL
Sbjct: 211 LKLMTIKRDKDQFTKYTITSLEKLWKPKIFVEPDLGIPL 249


>At5g35690.1 68418.m04267 expressed protein
          Length = 603

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +3

Query: 147 LLNFPAEIELCGVVKFGETLTTDST 221
           +LNFPA +E+  VV F + + ++ST
Sbjct: 547 ILNFPAAVEILSVVGFVDEMVSEST 571


>At5g08500.1 68418.m01007 transmembrane CLPTM1 family protein
           contains Pfam profile PF05602: Cleft lip and palate
           transmembrane protein 1 (CLPTM1)
          Length = 590

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 60  LMYDGTLLVVGFSLESFETETEKNSYSQLLLNFPAEIELCGVV 188
           L Y   LLVVGFS+ S   E  K+ YS +L +  + + + G +
Sbjct: 447 LSYVLLLLVVGFSIYSLAYERHKSWYSWILSSLTSCVYMFGFI 489


>At1g75290.1 68414.m08746 isoflavone reductase, putative similar to
           SP|P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-)
           {Arabidopsis thaliana}; contains Pfam profile PF02716:
           Isoflavone reductase
          Length = 323

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 111 ETETEKNSYSQLLLNFPAEIELCGVVKFGETLTTDSTTK-EILQDVDITDNPLIIIINRE 287
           + E E   Y+ L+ N+ A   L  +V+    LT+    K +I  D ++     I +IN+E
Sbjct: 140 DIEAEGIPYTYLVTNYFAGYYLPTLVQLEPGLTSPPRDKVKIFGDGNVKVEYFIAVINKE 199

Query: 288 KDMKAHFI 311
           +D+ A+ I
Sbjct: 200 EDIAAYTI 207


>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
           family protein similar to SP|Q9Z1T6 FYVE
           finger-containing phosphoinositide kinase (EC 2.7.1.68)
           (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
           (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF01363: FYVE zinc finger, PF00118:
           TCP-1/cpn60 chaperonin family
          Length = 1756

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 397 LCYPCDVKLPLLELKIHCKIRGKRLLQVKC 486
           +CY CD +  +   + HC++ G R+   KC
Sbjct: 41  VCYECDAQFTVFNRRHHCRLCG-RVFCAKC 69


>At5g18840.1 68418.m02239 sugar transporter, putative similar to
           ERD6 protein {Arabidopsis thaliana} GI:3123712,
           sugar-porter family protein 1 [Arabidopsis thaliana]
           GI:14585699; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 482

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ESFETETEKNSYSQLLLNFPAEIELCGVVKFGETLTTDSTTK-EILQDVDIT 254
           E  E E+E N  S L++ F   + +CG  +FG  +   + T+  I QD++++
Sbjct: 29  EDDEKESENNE-SYLMVLFSTFVAVCGSFEFGSCVGYSAPTQSSIRQDLNLS 79


>At4g28050.1 68417.m04024 senescence-associated protein, putative
           similar to senescence-associated protein 5 [Hemerocallis
           hybrid cultivar] gi|3551954|gb|AAC34855
          Length = 263

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 414 CEATIAGVKNSLQNKRKKIASGQVSFHIDSTQVYLFG 524
           CEA  AG+ ++++N  KK+A   + F I    VY  G
Sbjct: 215 CEACKAGLLDNIKNSWKKVAKVNIVFLIFLIIVYSVG 251


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,035,978
Number of Sequences: 28952
Number of extensions: 230964
Number of successful extensions: 618
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)