Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0856
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.61 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   0.81 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   3.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 20/79 (25%), Positives = 33/79 (41%)
 Frame = +3

Query: 81  KMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVY 260
           K   +H+   L E +S+  + D R++ N   +         T H    Y +F +   A  
Sbjct: 132 KSSTKHYAALLTERSSLVLRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFYISDKA-- 189

Query: 261 ANPENLEKYKTYEKRPLEE 317
           A P +L+ +   E   LEE
Sbjct: 190 ARPRSLQ-FVDSEGNILEE 207


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 569 YFLLFVYCYCNIKF 528
           +F  F +CYC IKF
Sbjct: 418 FFQQFFHCYCPIKF 431


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 360 NNPLSFSQMESCEYFLLEDV 301
           NN  ++S + +C Y+ L+D+
Sbjct: 104 NNFKTYSNVTTCSYYSLDDL 123


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 566 FLLFVYCYCN 537
           FLLFV+C C+
Sbjct: 294 FLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 566 FLLFVYCYCN 537
           FLLFV+C C+
Sbjct: 294 FLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 566 FLLFVYCYCN 537
           FLLFV+C C+
Sbjct: 294 FLLFVFCDCS 303


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 532 NSLSSKFGSGPLICT 488
           N +SSKF +G +IC+
Sbjct: 352 NLMSSKFRTGFIICS 366


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 174 EGVGTTGDVLTLHLNKAYENF 236
           + VGT G +L   L K YE++
Sbjct: 650 DDVGTFGAILKKLLPKVYEDY 670


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,324
Number of Sequences: 336
Number of extensions: 3204
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)