Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0856
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004517-1|AAH04517.1|  267|Homo sapiens mitochondrial ribosomal...    89   1e-17
AL589765-9|CAI17171.1|  267|Homo sapiens mitochondrial ribosomal...    89   1e-17
AB049636-1|BAB40841.1|  267|Homo sapiens mitochondrial ribosomal...    89   1e-17
AL589765-10|CAI17172.1|  233|Homo sapiens mitochondrial ribosoma...    76   8e-14
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                30   6.7  
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.          29   8.9  

>BC004517-1|AAH04517.1|  267|Homo sapiens mitochondrial ribosomal
           protein L9 protein.
          Length = 267

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
 Frame = +3

Query: 9   QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 188
           Q R T I+ R W  PL  +G K P++  RH VY LVEDT  + K ++ ++L Q VE VG 
Sbjct: 49  QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107

Query: 189 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVK---RTMDC 359
            GD++++  +      +  GLAVYA+PEN + ++  EK   +E        K    T+  
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEE-EKLLRQEGKLEKIQTKAGEATVKF 166

Query: 360 LHRLVLRVTMSNSEPWTLQPWHLKASFRKS-GFVVPESAIEMPPVQIKGPDPNLLDKEFY 536
           L    L V M N+  W L P  +   F K+ G VV    +++P       +P     E++
Sbjct: 167 LKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLP------EEPITRWGEYW 220

Query: 537 VTVTINKKEKVHV 575
             VT+N  + V V
Sbjct: 221 CEVTVNGLDTVRV 233


>AL589765-9|CAI17171.1|  267|Homo sapiens mitochondrial ribosomal
           protein L9 protein.
          Length = 267

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
 Frame = +3

Query: 9   QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 188
           Q R T I+ R W  PL  +G K P++  RH VY LVEDT  + K ++ ++L Q VE VG 
Sbjct: 49  QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107

Query: 189 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVK---RTMDC 359
            GD++++  +      +  GLAVYA+PEN + ++  EK   +E        K    T+  
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEE-EKLLRQEGKLEKIQTKAGEATVKF 166

Query: 360 LHRLVLRVTMSNSEPWTLQPWHLKASFRKS-GFVVPESAIEMPPVQIKGPDPNLLDKEFY 536
           L    L V M N+  W L P  +   F K+ G VV    +++P       +P     E++
Sbjct: 167 LKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLP------EEPITRWGEYW 220

Query: 537 VTVTINKKEKVHV 575
             VT+N  + V V
Sbjct: 221 CEVTVNGLDTVRV 233


>AB049636-1|BAB40841.1|  267|Homo sapiens mitochondrial ribosomal
           protein L9 (L9mt) protein.
          Length = 267

 Score = 89.0 bits (211), Expect = 1e-17
 Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 4/193 (2%)
 Frame = +3

Query: 9   QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 188
           Q R T I+ R W  PL  +G K P++  RH VY LVEDT  + K ++ ++L Q VE VG 
Sbjct: 49  QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107

Query: 189 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVK---RTMDC 359
            GD++++  +      +  GLAVYA+PEN + ++  EK   +E        K    T+  
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEE-EKLLRQEGKLEKIQTKAGEATVKF 166

Query: 360 LHRLVLRVTMSNSEPWTLQPWHLKASFRKS-GFVVPESAIEMPPVQIKGPDPNLLDKEFY 536
           L    L V M N+  W L P  +   F K+ G VV    +++P       +P     E++
Sbjct: 167 LKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLP------AEPITRWGEYW 220

Query: 537 VTVTINKKEKVHV 575
             VT+N  + V V
Sbjct: 221 CEVTVNGLDTVRV 233


>AL589765-10|CAI17172.1|  233|Homo sapiens mitochondrial ribosomal
           protein L9 protein.
          Length = 233

 Score = 76.2 bits (179), Expect = 8e-14
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +3

Query: 9   QTRNTFILRRRWPPPLHKKGGKVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVEGVGT 188
           Q R T I+ R W  PL  +G K P++  RH VY LVEDT  + K ++ ++L Q VE VG 
Sbjct: 49  QNRGTVIVERWWKVPLAGEGRK-PRLHRRHRVYKLVEDTKHRPKENLELILTQSVENVGV 107

Query: 189 TGDVLTLHLNKAYENFILPGLAVYANPENLEKYK 290
            GD++++  +      +  GLAVYA+PEN + ++
Sbjct: 108 RGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFE 141


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
 Frame = +3

Query: 225   YENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMDCLHRLVLRVTMSNSEP 404
             YE +       Y   E  ++Y+ YE+R  E       ++           + V     EP
Sbjct: 10675 YEEYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEEYITEP-----EKPIPVKPVPEEP 10729

Query: 405   WTLQPWHLKASFRKSGFVVPESAIEMP-PVQIKGPDPNLLDK-----EFYVTVTINKKEK 566
                +P    A   K    VPE  + +P P ++K P P + ++     E  + ++I K+EK
Sbjct: 10730 VPTKPKAPPAKVLKK--AVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEEKIRISITKREK 10787

Query: 567   VHV 575
               V
Sbjct: 10788 EQV 10790


>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
          Length = 7962

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
 Frame = +3

Query: 225  YENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMDCLHRLVLRVTMSNSEP 404
            YE +       Y   E  ++Y+ YE+R  E       ++           + V     EP
Sbjct: 6413 YEEYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEEYITEP-----EKPIPVKPVPEEP 6467

Query: 405  WTLQPWHLKASFRKSGFVVPESAIEMP-PVQIKGPDPNLLDK-----EFYVTVTINKKEK 566
               +P    A   K    VPE  + +P P ++K P P + ++     E  + ++I K+EK
Sbjct: 6468 VPTKPKAPPAKVLKK--AVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEEKIHISITKREK 6525

Query: 567  VHV 575
              V
Sbjct: 6526 EQV 6528


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,436,961
Number of Sequences: 237096
Number of extensions: 1885734
Number of successful extensions: 3897
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3893
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)