Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0856
         (576 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067211-12|AAK66018.2|  276|Caenorhabditis elegans Hypothetical...    81   7e-16
Z82272-1|CAB05218.1|  341|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical pr...    28   4.1  
U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z46242-9|CAA86334.2|  491|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF067211-12|AAK66018.2|  276|Caenorhabditis elegans Hypothetical
           protein B0205.11 protein.
          Length = 276

 Score = 80.6 bits (190), Expect = 7e-16
 Identities = 56/191 (29%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
 Frame = +3

Query: 3   KRQTRNTFILRRRWPPPLHKKGG--KVPKMKGRHFVYDLVEDTSVKKKPDIRIVLNQFVE 176
           ++ +RNT++LRR + P +   GG  K P     +  Y++VE  + K    I ++L Q VE
Sbjct: 16  RQASRNTWVLRRVFQPEVTPPGGVQKNPNDFHDYQKYEVVEFETQKSAGPINVILLQDVE 75

Query: 177 GVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEE--NTHSSPF-VKR 347
           G+G   DV+++    A ++ +L   AVYA+P +L+ Y   + R  EE  +    P+ +K 
Sbjct: 76  GIGHQFDVVSVDRTLARKDLLLSKKAVYASPFDLKYYSDMKTRMAEELASRIRIPYELKV 135

Query: 348 TMDCLHRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPDPNLLDK 527
               L ++V+ + ++    WT+    +K+S R+ G  V E+ I +    I GP+ ++  K
Sbjct: 136 VGRDLQKMVIPIKVNMENQWTIDRNLVKSSLRQMGVFVAENTIFLAAKPISGPNFDIEAK 195

Query: 528 EFYVTVTINKK 560
            F   V +N++
Sbjct: 196 LFRFYVVVNQQ 206



 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = +3

Query: 159 LNQFVEGVGTTGDVLTLHLNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSP 335
           L++FV+ +       T  L + ++  + P   V  NP +   Y+ YE    E    + P
Sbjct: 7   LHRFVQHINRQASRNTWVLRRVFQPEVTPPGGVQKNPNDFHDYQKYEVVEFETQKSAGP 65


>Z82272-1|CAB05218.1|  341|Caenorhabditis elegans Hypothetical
           protein F55G11.2 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 162 NQFVEGVGTTGDVLTLHLNKAYENFILP-GLAVYANPENLEKY 287
           +QFV  VGTTG V+      +   F +P GL + + PE+L+ Y
Sbjct: 137 SQFVGLVGTTGLVVNATETVSAMGFYIPGGLTLLSFPEDLKNY 179


>Z83244-6|CAD18877.1|  502|Caenorhabditis elegans Hypothetical
           protein W06F12.2c protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 414 QPWHLKASFRKSGFVVPESAIEMPPVQIKGPDP 512
           QP+ +  S+ ++G  VP++ I +PP QI  P P
Sbjct: 223 QPYPVFPSYSRAG--VPQTPIPLPPTQINTPYP 253


>Z83244-5|CAB54315.1|  568|Caenorhabditis elegans Hypothetical
           protein W06F12.2b protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 414 QPWHLKASFRKSGFVVPESAIEMPPVQIKGPDP 512
           QP+ +  S+ ++G  VP++ I +PP QI  P P
Sbjct: 223 QPYPVFPSYSRAG--VPQTPIPLPPTQINTPYP 253


>Z83244-4|CAB54314.1|  562|Caenorhabditis elegans Hypothetical
           protein W06F12.2a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 414 QPWHLKASFRKSGFVVPESAIEMPPVQIKGPDP 512
           QP+ +  S+ ++G  VP++ I +PP QI  P P
Sbjct: 217 QPYPVFPSYSRAG--VPQTPIPLPPTQINTPYP 247


>Z68159-3|CAD89733.1|  351|Caenorhabditis elegans Hypothetical
           protein C33D9.3b protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 333 PFVKRTMDCLHRLVLRVTMSN-SEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPD 509
           PF K T   +H+ + +    N S   T  P   K+S  KS    P  A+  PPV +K P+
Sbjct: 255 PFQKETTCYIHQKLCKSRFVNVSTTDTPIPKSSKSSPGKS---TPTFALPSPPVPLKSPE 311

Query: 510 P 512
           P
Sbjct: 312 P 312


>Z68159-2|CAD89732.1|  354|Caenorhabditis elegans Hypothetical
           protein C33D9.3a protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 333 PFVKRTMDCLHRLVLRVTMSN-SEPWTLQPWHLKASFRKSGFVVPESAIEMPPVQIKGPD 509
           PF K T   +H+ + +    N S   T  P   K+S  KS    P  A+  PPV +K P+
Sbjct: 258 PFQKETTCYIHQKLCKSRFVNVSTTDTPIPKSSKSSPGKS---TPTFALPSPPVPLKSPE 314

Query: 510 P 512
           P
Sbjct: 315 P 315


>U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical
           protein C03F11.4 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +3

Query: 186 TTGDVLTLH-LNKAYENFILPGLAVYANPENLEKYKTYEKRPLEENTHSSPFVKRTMDCL 362
           T  +VLTL  + K +E+     L V    E  E Y ++EK  L +   +   V      +
Sbjct: 260 TKFEVLTLSFVMKGFED---DWLEVNGTYEENESYLSFEKNILHDIPETDQHVNAAEFVM 316

Query: 363 HRLVLRVTMSNSEPWTLQPWHLKASFRKSGFVVPE 467
           ++L+      +     L+  H+K ++  +G ++ E
Sbjct: 317 NKLIYYAKKDDDGTLNLKECHMKEAYTGAGQLIAE 351


>Z46242-9|CAA86334.2|  491|Caenorhabditis elegans Hypothetical
           protein F35G12.12 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = -1

Query: 390 SLLHEVLICVNNPLSFSQMESCEY------FLLEDVFHRFYIFPNFLDW 262
           +L H  +  V  P  F +M++C Y      F    V H+F  F  F+DW
Sbjct: 380 ALTHVAVGNVKKP--FPEMKNCIYDFWQQLFTYPSVVHQFITFQGFIDW 426


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,945,425
Number of Sequences: 27780
Number of extensions: 292536
Number of successful extensions: 818
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)