Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0854
         (517 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IM11 Cluster: Putative uncharacterized protein; n=1; ...    37   0.24 
UniRef50_Q8ZXB3 Cluster: Putative uncharacterized protein PAE136...    33   2.9  

>UniRef50_Q8IM11 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 195

 Score = 37.1 bits (82), Expect = 0.24
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -1

Query: 208 KLINENVSYKNLQHNKKKYTRTKTINLNVAN 116
           K+I  NV+Y N++ N K Y +TK +N+N  N
Sbjct: 60  KMIKRNVTYLNIKENDKNYLKTKKVNINKDN 90


>UniRef50_Q8ZXB3 Cluster: Putative uncharacterized protein PAE1365;
           n=2; Pyrobaculum|Rep: Putative uncharacterized protein
           PAE1365 - Pyrobaculum aerophilum
          Length = 115

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 13/32 (40%), Positives = 24/32 (75%)
 Frame = +2

Query: 323 IFSSRWYLPSRKIVINFTIYTYTELTLQYTDI 418
           +FS    L +R++V++ ++YTYT++ + YTDI
Sbjct: 62  LFSGFLLLLARELVLSISMYTYTDIYVPYTDI 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,241,814
Number of Sequences: 1657284
Number of extensions: 6676570
Number of successful extensions: 17999
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17967
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)