Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0853
         (539 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical pr...    31   0.70 
U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical p...    28   3.7  
U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine rece...    28   4.9  
U23528-8|AAK31386.2|  293|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81040-1|CAB02781.1|  145|Caenorhabditis elegans Hypothetical pr...    27   8.6  
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    27   8.6  
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch...    27   8.6  
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch...    27   8.6  

>Z68219-5|CAJ43449.1|  343|Caenorhabditis elegans Hypothetical
           protein T05A1.5b protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 232 IGYCSLNEFLYGFET*KKILQFLKTCFPCVLFCVFITFLL 113
           IGYCS++     F T + +   L T  PCVLF + + F L
Sbjct: 219 IGYCSVSPLAMYFSTWRYVQ--LATSVPCVLFGILMMFTL 256


>Z68219-4|CAA92482.2|  359|Caenorhabditis elegans Hypothetical
           protein T05A1.5a protein.
          Length = 359

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 232 IGYCSLNEFLYGFET*KKILQFLKTCFPCVLFCVFITFLL 113
           IGYCS++     F T + +   L T  PCVLF + + F L
Sbjct: 235 IGYCSVSPLAMYFSTWRYVQ--LATSVPCVLFGILMMFTL 272


>U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical
           protein B0507.1 protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -2

Query: 481 VCVSTIRMLPESKRLMLRTMANLTGTQLLCQFCRRKIMKSHLKGF 347
           VC + +   P++K+ M+     +TG  ++CQF + ++M     GF
Sbjct: 129 VCCTKLPTCPKTKKTMVNF---ITGKPIMCQFKQGRVMPCPENGF 170


>U80444-3|AAB37789.1|  326|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 14 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 271 FINLSAILSSISWPVASLYSANTFF 345
           F+N SA+L +I W    +YS N+FF
Sbjct: 45  FLN-SAVLGTILWRCREVYSTNSFF 68


>U23528-8|AAK31386.2|  293|Caenorhabditis elegans Hypothetical
           protein B0034.5 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
 Frame = +1

Query: 73  FLGYIMFLLYVLGLRGKL*IHKKEHMGNRSLEIVKFSFMFQIHIKIHSMSNTLFLSTLTL 252
           FL + + LL  LG+  +L    +   GNRS    +FS   Q    +   + T+    +  
Sbjct: 148 FLPFALLLLINLGIVLELRSQMQHAFGNRSRR--RFSLRMQSRTNVRQATATMLFICVIY 205

Query: 253 GALFSFFINLSAILSSISWPVASLYSANT-FF*SLLNGTSLSFFCKTDIITACQLNLPLF 429
             L S  +N+       +W    + S  T F    +    LS      ++TAC L LP++
Sbjct: 206 --LISNVVNVFIT----AWEFIDIESLQTRFLEEYMLSADLSSVL---VVTACALRLPIY 256


>Z93385-5|CAB07639.1|  734|Caenorhabditis elegans Hypothetical
           protein M01E5.5b protein.
          Length = 734

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 153 KQVFRNCKIFFHVSNPYKNSFNEQYPIFVNPHIRSTL 263
           K+V++N KIF     P  + F+      +N H+RS +
Sbjct: 522 KRVYKNLKIFMEGKAPSDDLFDRLDTATLNDHLRSLM 558


>Z93385-4|CAB07640.1|  806|Caenorhabditis elegans Hypothetical
           protein M01E5.5a protein.
          Length = 806

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 153 KQVFRNCKIFFHVSNPYKNSFNEQYPIFVNPHIRSTL 263
           K+V++N KIF     P  + F+      +N H+RS +
Sbjct: 594 KRVYKNLKIFMEGKAPSDDLFDRLDTATLNDHLRSLM 630


>Z81040-1|CAB02781.1|  145|Caenorhabditis elegans Hypothetical
           protein C26E1.1 protein.
          Length = 145

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 28/93 (30%), Positives = 41/93 (44%)
 Frame = -1

Query: 401 VIMSVLQKKDNEVPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKSAPNVRVDKNRVL 222
           ++  V   +D + P KR    +     + TGQ+ID     K +  LK A   R DK R +
Sbjct: 64  LLQFVKTPEDLDRPRKRAIIHICRRIKKITGQDIDPEYISKLLYGLKRA---RRDKFRKI 120

Query: 221 LIE*IFIWI*NMKENFTISKDLFPMCSFLCIYN 123
             E IF     +  +FT     F  C+F C+ N
Sbjct: 121 NRE-IFR---GLNWDFT----QFEKCTFKCVLN 145


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 153 KQVFRNCKIFFHVSNPYKNSFNEQYPIFVNPHIRSTL 263
           K+V++N KIF     P  + F+      +N H+RS +
Sbjct: 594 KRVYKNLKIFMEGKAPSDDLFDRLDTATLNDHLRSLM 630


>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
            protein 1 protein.
          Length = 4568

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -1

Query: 365  VPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKS 258
            V  + L+K +LA  +E+ G+ +DD    + ++KLK+
Sbjct: 3683 VRLRHLEKALLAALNESKGKILDDNSVIETLEKLKN 3718


>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
            protein.
          Length = 4568

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -1

Query: 365  VPFKRLQKKVLAEYSEATGQEIDDRIADKFIKKLKS 258
            V  + L+K +LA  +E+ G+ +DD    + ++KLK+
Sbjct: 3683 VRLRHLEKALLAALNESKGKILDDNSVIETLEKLKN 3718


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,861,836
Number of Sequences: 27780
Number of extensions: 185723
Number of successful extensions: 640
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)