Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0852
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -3

Query: 339 LSAVEYCKVCD-AFFEIK 289
           +SAV  CKVCD AF  +K
Sbjct: 544 VSAVLTCKVCDQAFSSLK 561


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +2

Query: 116 VIIINNYCLKLSNASDVELPIIINKH 193
           +I++  YC+   N       +++NKH
Sbjct: 251 IILLILYCIIAKNLMSNAATLVLNKH 276


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
          protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 61 YNIKYHNINYK 29
          Y IKY N+N K
Sbjct: 23 YTIKYDNVNLK 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,911
Number of Sequences: 336
Number of extensions: 2260
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)