Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0851
(664 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g11910.1 68414.m01374 aspartyl protease family protein contai... 119 2e-27
At1g62290.1 68414.m07027 aspartyl protease family protein contai... 117 8e-27
At4g04460.1 68417.m00648 aspartyl protease family protein contai... 115 2e-26
At4g22050.1 68417.m03189 aspartyl protease family protein contai... 75 4e-14
At1g69100.1 68414.m07907 aspartyl protease family protein contai... 71 7e-13
At3g42550.1 68416.m04414 aspartyl protease family protein weak s... 48 6e-06
At3g51350.1 68416.m05622 aspartyl protease family protein contai... 43 2e-04
At1g31450.1 68414.m03851 aspartyl protease family protein contai... 43 2e-04
At5g45120.1 68418.m05539 aspartyl protease family protein contai... 42 3e-04
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 42 3e-04
At1g05840.1 68414.m00611 aspartyl protease family protein contai... 41 6e-04
At2g35615.1 68415.m04367 aspartyl protease family protein contai... 41 8e-04
At5g10080.1 68418.m01168 aspartyl protease family protein contai... 40 0.001
At3g12700.1 68416.m01587 aspartyl protease family protein contai... 40 0.001
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 40 0.001
At5g36260.1 68418.m04374 aspartyl protease family protein contai... 40 0.002
At5g22850.1 68418.m02671 aspartyl protease family protein contai... 40 0.002
At3g51340.1 68416.m05620 aspartyl protease family protein contai... 39 0.003
At2g36670.1 68415.m04497 aspartyl protease family protein contai... 39 0.003
At2g23945.1 68415.m02859 chloroplast nucleoid DNA-binding protei... 39 0.003
At3g52500.1 68416.m05773 aspartyl protease family protein contai... 38 0.008
At1g65240.1 68414.m07396 aspartyl protease family protein contai... 38 0.008
At5g33340.1 68418.m03957 aspartyl protease family protein contai... 37 0.010
At3g25700.1 68416.m03198 chloroplast nucleoid DNA-binding protei... 37 0.010
At1g64830.1 68414.m07350 aspartyl protease family protein contai... 37 0.010
At5g43100.1 68418.m05261 aspartyl protease family protein low si... 36 0.018
At3g51360.1 68416.m05624 aspartyl protease family protein contai... 36 0.018
At2g28010.1 68415.m03394 aspartyl protease family protein contai... 36 0.018
At1g66180.1 68414.m07512 aspartyl protease family protein contai... 36 0.018
At1g01300.1 68414.m00046 aspartyl protease family protein contai... 36 0.018
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 36 0.024
At2g28040.1 68415.m03399 aspartyl protease family protein contai... 36 0.024
At3g50050.1 68416.m05472 aspartyl protease family protein contai... 36 0.032
At3g02740.1 68416.m00266 aspartyl protease family protein contai... 36 0.032
At2g42980.1 68415.m05332 aspartyl protease family protein contai... 36 0.032
At5g02190.1 68418.m00140 aspartyl protease family protein contai... 35 0.042
At3g61820.1 68416.m06939 aspartyl protease family protein contai... 35 0.042
At4g35880.1 68417.m05095 aspartyl protease family protein contai... 35 0.056
At1g44130.1 68414.m05097 nucellin protein, putative similar to n... 35 0.056
At2g17760.1 68415.m02057 aspartyl protease family protein contai... 34 0.073
At5g10760.1 68418.m01250 aspartyl protease family protein contai... 34 0.097
At3g51330.1 68416.m05619 aspartyl protease family protein contai... 34 0.097
At3g20015.1 68416.m02532 aspartyl protease family protein contai... 33 0.13
At3g18490.1 68416.m02350 aspartyl protease family protein contai... 33 0.13
At1g77480.2 68414.m09023 nucellin protein, putative similar to n... 33 0.13
At1g77480.1 68414.m09022 nucellin protein, putative similar to n... 33 0.13
At2g39710.1 68415.m04872 aspartyl protease family protein contai... 33 0.22
At1g09750.1 68414.m01094 chloroplast nucleoid DNA-binding protei... 33 0.22
At5g10770.1 68418.m01252 chloroplast nucleoid DNA-binding protei... 32 0.30
At2g28220.1 68415.m03426 aspartyl protease family protein contai... 31 0.52
At5g37540.1 68418.m04521 aspartyl protease family protein weak s... 31 0.68
At2g28030.1 68415.m03397 aspartyl protease family protein contai... 31 0.68
At2g03200.1 68415.m00273 aspartyl protease family protein contai... 31 0.68
At4g33490.1 68417.m04756 nucellin protein, putative similar to n... 31 0.90
At3g54400.1 68416.m06015 aspartyl protease family protein contai... 31 0.90
At5g07030.1 68418.m00796 aspartyl protease family protein contai... 30 1.2
At4g30030.1 68417.m04273 aspartyl protease family protein contai... 29 2.8
At1g66680.1 68414.m07579 S locus-linked protein, putative simila... 29 3.6
At1g52190.1 68414.m05889 proton-dependent oligopeptide transport... 29 3.6
At1g03220.1 68414.m00300 extracellular dermal glycoprotein, puta... 29 3.6
At4g30040.1 68417.m04274 aspartyl protease family contains Pfam ... 28 4.8
At1g25510.1 68414.m03168 aspartyl protease family protein contai... 28 4.8
>At1g11910.1 68414.m01374 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 506
Score = 119 bits (286), Expect = 2e-27
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +2
Query: 428 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKT 607
L NYLDAQYYG I+IGTPPQ F VVFDTGSSNLWVPS KC Y ++ACLLH KY S +S T
Sbjct: 74 LKNYLDAQYYGEIAIGTPPQKFTVVFDTGSSNLWVPSSKC-YFSLACLLHPKYKSSRSST 132
Query: 608 YVANGTQFAIQYGSGSLSG 664
Y NG AI YG+G+++G
Sbjct: 133 YEKNGKAAAIHYGTGAIAG 151
>At1g62290.1 68414.m07027 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 513
Score = 117 bits (281), Expect = 8e-27
Identities = 52/80 (65%), Positives = 62/80 (77%)
Frame = +2
Query: 425 PLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSK 604
PL NYLDAQYYG I+IGTPPQ F V+FDTGSSNLWVPS KC + +++C H KY S +S
Sbjct: 80 PLKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSGKCFF-SLSCYFHAKYKSSRSS 138
Query: 605 TYVANGTQFAIQYGSGSLSG 664
TY +G + AI YGSGS+SG
Sbjct: 139 TYKKSGKRAAIHYGSGSISG 158
>At4g04460.1 68417.m00648 aspartyl protease family protein contains
Pfam profiles: PF00026 eukaryotic aspartyl protease,
PF03489 surfactant protein B, PF05184 saposin-like type
B, region 1
Length = 508
Score = 115 bits (277), Expect = 2e-26
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = +2
Query: 425 PLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSK 604
PL NYLDAQYYG I+IGTPPQ F V+FDTGSSNLW+PS KC Y ++AC H+KY + +S
Sbjct: 78 PLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLWIPSTKC-YLSVACYFHSKYKASQSS 136
Query: 605 TYVANGTQFAIQYGSGSLSG 664
+Y NG +I+YG+G++SG
Sbjct: 137 SYRKNGKPASIRYGTGAISG 156
>At4g22050.1 68417.m03189 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 354
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +2
Query: 428 LSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKT 607
L N D YYG I IG P Q+F V+FDTGSS+LWVPS+ ++ N+Y S S+T
Sbjct: 38 LKNVKDFLYYGKIQIGNPGQTFTVLFDTGSSSLWVPSE--NWLAKTENPRNRYISSASRT 95
Query: 608 YVANGTQFAIQYGSGSLSG 664
+ NGT+ ++YG GSL+G
Sbjct: 96 FKENGTKAELKYGKGSLTG 114
>At1g69100.1 68414.m07907 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 343
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +2
Query: 377 LELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYT 556
+ L R +V G S L N+ +YG IS+G+PPQ F VVFDTGS++LWVPSK+ +
Sbjct: 22 ISLKRHTLNVGGTSFGGLKNFDGVVFYGEISVGSPPQKFNVVFDTGSTDLWVPSKE--WP 79
Query: 557 NIACLLHNKYDSRKSKT-YVANGTQFAIQYGSGSLSG 664
H K+D SKT + G + I Y +GS+ G
Sbjct: 80 EETDHKHPKFDKDASKTCRLMKGGEVNIAYETGSVVG 116
>At3g42550.1 68416.m04414 aspartyl protease family protein weak
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 356
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +2
Query: 440 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN 580
L A YY + IGTPP+ VV DTGS +WV C + C LHN
Sbjct: 74 LSALYYTTVQIGTPPRELDVVIDTGSDLVWVSCNSC----VGCPLHN 116
>At3g51350.1 68416.m05622 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 440 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWVP 535
L + YY +S+GTPP SF V DTGS W+P
Sbjct: 98 LGSLYYANVSVGTPPSSFLVALDTGSDLFWLP 129
>At1g31450.1 68414.m03851 aspartyl protease family protein contains
eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 445
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK--YDSRKSKTY 610
+Y+ ISIGTPP + DTGS WV K C C N +D +KS TY
Sbjct: 84 EYFMSISIGTPPSKVFAIADTGSDLTWVQCKPCQ----QCYKQNSPLFDKKKSSTY 135
>At5g45120.1 68418.m05539 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 491
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +2
Query: 422 EPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIAC 568
EPL D Y ++IGTPPQ+ +V DTGS WVP + I C
Sbjct: 74 EPLREVRDG-YLITLNIGTPPQAVQVYLDTGSDLTWVPCGNLSFDCIEC 121
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 437 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH 550
+L YY + +GTPP+ F V DTGS LWV C+
Sbjct: 79 FLVGLYYTKVKLGTPPREFNVQIDTGSDVLWVSCTSCN 116
>At1g05840.1 68414.m00611 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease
Length = 485
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHY------TNIACLLHNKYDSRKSKTYV 613
YY I IGTP +S+ V DTGS +WV +C I L+N D S V
Sbjct: 80 YYAKIGIGTPAKSYYVQVDTGSDIMWVNCIQCKQCPRRSTLGIELTLYN-IDESDSGKLV 138
Query: 614 ANGTQFAIQYGSGSLSG 664
+ F Q G LSG
Sbjct: 139 SCDDDFCYQISGGPLSG 155
>At2g35615.1 68415.m04367 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 447
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 443 DAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK--YDSRKSKTY 610
D +++ I+IGTPP + DTGS WV K C C N +D +KS TY
Sbjct: 82 DGEFFMSITIGTPPIKVFAIADTGSDLTWVQCKPCQ----QCYKENGPIFDKKKSSTY 135
>At5g10080.1 68418.m01168 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 528
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSK 604
+Y I IGTP SF V DTGS+ LW+P C+ A L Y S +K
Sbjct: 100 HYTWIDIGTPSVSFLVALDTGSNLLWIP---CNCVQCAPLTSTYYSSLATK 147
>At3g12700.1 68416.m01587 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease; similar to
CND41, chloroplast nucleoid DNA binding protein
(GI:2541876) [Nicotiana tabacum]
Length = 461
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +2
Query: 434 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHY 553
+Y AQY+ I +GTP + F+VV DTGS WV C Y
Sbjct: 100 DYGTAQYFTEIRVGTPAKKFRVVVDTGSELTWV---NCRY 136
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 437 YLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
YL Y+ + +G+PP F V DTGS LWV C
Sbjct: 95 YLVGLYFTKVKLGSPPTEFNVQIDTGSDILWVTCSSC 131
>At5g36260.1 68418.m04374 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 482
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWV---PSKKCHYTNIACLLHNKYDSRKSKT 607
Y+ I +G+PP+ + V DTGS LWV P KC + + YDS+ S T
Sbjct: 78 YFTKIKLGSPPKEYYVQVDTGSDILWVNCAPCPKCPVKTDLGIPLSLYDSKTSST 132
>At5g22850.1 68418.m02671 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 493
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH 550
YY + +GTPP+ F V DTGS LWV C+
Sbjct: 81 YYTKLRLGTPPRDFYVQVDTGSDVLWVSCASCN 113
>At3g51340.1 68416.m05620 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 518
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 434 NYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 613
N+L +Y +S+GTP F V DTGS W+P C T C +H+ D+R S++
Sbjct: 85 NFLGFLHYANVSLGTPATWFLVALDTGSDLFWLPC-NCGTT---C-IHDLKDARFSESVP 139
Query: 614 AN 619
N
Sbjct: 140 LN 141
>At2g36670.1 68415.m04497 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 512
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 398 YDVTGPS-PEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
+ V G S P + + + Y+ + +G+PP F V DTGS LWV C
Sbjct: 86 FPVQGSSDPYLVGSKMTMLYFTKVKLGSPPTEFNVQIDTGSDILWVTCSSC 136
>At2g23945.1 68415.m02859 chloroplast nucleoid DNA-binding
protein-related contains weak similarity to
GP|2541876|dbj|BAA22813.1||D26015 CND41, chloroplast
nucleoid DNA binding protein {Nicotiana tabacum}
Length = 458
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 467 SIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYV 613
S+G PP + DTGSS LW+ + C + + ++H ++ S T+V
Sbjct: 101 SVGQPPVPQLTIMDTGSSLLWIQCQPCKHCSSDHMIHPVFNPALSSTFV 149
>At3g52500.1 68416.m05773 aspartyl protease family protein contains
Pfam PF00026: eukaryotic aspartyl protease
Length = 469
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 425 PLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVP 535
PLS Y +S GTP Q+ VFDTGSS +W+P
Sbjct: 81 PLSAKSYGGYSVSLSFGTPSQTIPFVFDTGSSLVWLP 117
>At1g65240.1 68414.m07396 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 475
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
Y+ I +G+PP+ + V DTGS LW+ K C
Sbjct: 74 YFTKIKLGSPPKEYHVQVDTGSDILWINCKPC 105
>At5g33340.1 68418.m03957 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 437
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 413 PSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH--YTNIACLLHNKY 586
P P+ +Y +SIGTPP + DTGS LW C YT + L +
Sbjct: 77 PQPQIDLTSNSGEYLMNVSIGTPPFPIMAIADTGSDLLWTQCAPCDDCYTQVDPL----F 132
Query: 587 DSRKSKTY 610
D + S TY
Sbjct: 133 DPKTSSTY 140
>At3g25700.1 68416.m03198 chloroplast nucleoid DNA-binding
protein-related contains weak similarity to CND41,
chloroplast nucleoid DNA binding protein (GI:2541876)
[Nicotiana tabacum]
Length = 452
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
QY+ + IG PPQS ++ DTGS +WV C
Sbjct: 83 QYFVDLRIGQPPQSLLLIADTGSDLVWVKCSAC 115
>At1g64830.1 68414.m07350 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 431
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 401 DVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH--YTNIACLL 574
D + SP+ +Y ISIGTPP + DTGS +W C Y + L
Sbjct: 69 DASPNSPQSFITSNRGEYLMNISIGTPPVPILAIADTGSDLIWTQCNPCEDCYQQTSPL- 127
Query: 575 HNKYDSRKSKTY 610
+D ++S TY
Sbjct: 128 ---FDPKESSTY 136
>At5g43100.1 68418.m05261 aspartyl protease family protein low
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 631
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 470 IGTPPQSFKVVFDTGSSNLWVPSKKC 547
IGTPPQ F ++ DTGS+ +VP C
Sbjct: 82 IGTPPQEFALIVDTGSTVTYVPCSTC 107
>At3g51360.1 68416.m05624 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 488
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 610
+Y ++IGTP Q F V DTGS W+P C+ T + + ++ + K Y
Sbjct: 89 HYANVTIGTPAQWFLVALDTGSDLFWLPC-NCNSTCVRSMETDQGERIKLNIY 140
>At2g28010.1 68415.m03394 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 396
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = +2
Query: 389 RLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLW---VPSKKCHYTN 559
R+ +G SP + + ++ Y + +GTPP + + DTGS W +P C+ N
Sbjct: 44 RVSNTQSGSSPYANTVFDNSVYLMKLQVGTPPFEIQAIIDTGSEITWTQCLPCVHCYEQN 103
Query: 560 IACLLHNKYDSRKSKTYVANGTQFAIQY 643
+K + K K + + + Y
Sbjct: 104 APIFDPSKSSTFKEKRCDGHSCPYEVDY 131
>At1g66180.1 68414.m07512 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease profile;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]
Length = 430
Score = 36.3 bits (80), Expect = 0.018
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Frame = +2
Query: 275 FFLALIASSVMALYRVPLHRMK-TARTHFHEVGTELELLRLKYDVTGPSPE-PLSNYLDA 448
FFL ++ S +PL + + T+ H T L L K PSP P N+
Sbjct: 12 FFLNYVSLSTSLSLHLPLTSLPISTTTNSHRFTTSL--LSRK----NPSPSSPPYNFRSR 65
Query: 449 QYYGV-----ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 610
Y + + IGTPPQ+ ++V DTGS W+ +CH + +D S ++
Sbjct: 66 FKYSMALIISLPIGTPPQAQQMVLDTGSQLSWI---QCHRKKLPPKPKTSFDPSLSSSF 121
>At1g01300.1 68414.m00046 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 485
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWV---PSKKCHYTNIACLLHNKYDSRKSKTY 610
+Y+ + +GTP + +V DTGS +W+ P ++C+ + +D RKSKTY
Sbjct: 141 EYFTRLGVGTPARYVYMVLDTGSDIVWLQCAPCRRCYSQSDPI-----FDPRKSKTY 192
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK--YDSRKSKTY 610
+Y+ + +G+PP+ F ++ DTGS W+ C+ C N YD + S +Y
Sbjct: 169 EYFMDVLVGSPPKHFSLILDTGSDLNWIQCLPCY----DCFQQNGAFYDPKASASY 220
>At2g28040.1 68415.m03399 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 395
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC-HYTNIACLLHNKYDSRKSKTY 610
+Y + IGTPP + V DTGS ++W C H N + +D KS T+
Sbjct: 64 EYLMKLQIGTPPFEIEAVLDTGSEHIWTQCLPCVHCYNQTAPI---FDPSKSSTF 115
>At3g50050.1 68416.m05472 aspartyl protease family protein contains
Pfam PF00026: Eukaryotic aspartyl protease
Length = 632
Score = 35.5 bits (78), Expect = 0.032
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 440 LDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHN--KYDSRKSKTY 610
++ Y + IGTPPQ F ++ D+GS+ +VP C C H K+ S TY
Sbjct: 89 INGYYTTRLWIGTPPQMFALIVDSGSTVTYVPCSDCE----QCGKHQDPKFQPEMSSTY 143
>At3g02740.1 68416.m00266 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 488
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
Y+ I +GTP + F V DTGS LWV C
Sbjct: 85 YFAKIGLGTPSRDFHVQVDTGSDILWVNCAGC 116
>At2g42980.1 68415.m05332 aspartyl protease family protein contains
pfam profile: PF00026 eukaryotic aspartyl protease
Length = 527
Score = 35.5 bits (78), Expect = 0.032
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCH 550
+Y+ + +GTPP+ F ++ DTGS W+ C+
Sbjct: 159 EYFMDVLVGTPPKHFSLILDTGSDLNWLQCLPCY 192
>At5g02190.1 68418.m00140 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease
Length = 453
Score = 35.1 bits (77), Expect = 0.042
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 610
+++GTPPQ+ +V DTGS W+ + N N +D +S +Y
Sbjct: 77 LTVGTPPQNISMVIDTGSELSWLRCNRSSNPNPV----NNFDPTRSSSY 121
>At3g61820.1 68416.m06939 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 35.1 bits (77), Expect = 0.042
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWV---PSKKCHYTNIACLLHNKYDSRKSKTY 610
+Y+ + +GTP + +V DTGS +W+ P K C+ A +D +KSKT+
Sbjct: 134 EYFMRLGVGTPATNVYMVLDTGSDVVWLQCSPCKACYNQTDAI-----FDPKKSKTF 185
>At4g35880.1 68417.m05095 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 524
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVP 535
+Y + +GTP F V DTGS WVP
Sbjct: 107 HYTTVKLGTPGMRFMVALDTGSDLFWVP 134
>At1g44130.1 68414.m05097 nucellin protein, putative similar to
nucellin GI:2290202 from [Hordeum vulgare]
Length = 405
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 425 PLS-NYLDAQYYGVI-SIGTPPQSFKVVFDTGSSNLWV 532
PLS N YY V+ IG+PP++F+ DTGS WV
Sbjct: 38 PLSGNVFPLGYYSVLMQIGSPPKAFQFDIDTGSDLTWV 75
>At2g17760.1 68415.m02057 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 513
Score = 34.3 bits (75), Expect = 0.073
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTN 559
+Y +++GTP F V DTGS W+P C TN
Sbjct: 104 HYANVTVGTPSDWFMVALDTGSDLFWLP---CDCTN 136
>At5g10760.1 68418.m01250 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 464
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
Y I IGTP +VFDTGS W + C
Sbjct: 132 YIVTIGIGTPKHDLSLVFDTGSDLTWTQCEPC 163
>At3g51330.1 68416.m05619 aspartyl protease family protein contains
Eukaryotic and viral aspartyl proteases active site,
PROSITE:PS00141
Length = 529
Score = 33.9 bits (74), Expect = 0.097
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVP 535
+Y +S+GTP F V DTGS W+P
Sbjct: 102 HYANVSVGTPATWFLVALDTGSDLFWLP 129
>At3g20015.1 68416.m02532 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 386
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
+Y+ I +G+PP+ +V D+GS +WV + C
Sbjct: 46 EYFVRIGVGSPPRDQYMVIDSGSDMVWVQCQPC 78
>At3g18490.1 68416.m02350 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 500
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
+Y+ I +GTP + +V DTGS W+ + C
Sbjct: 161 EYFSRIGVGTPAKEMYLVLDTGSDVNWIQCEPC 193
>At1g77480.2 68414.m09023 nucellin protein, putative similar to
nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare]
(nucellin: similar to aspartic protease and its specific
expression in nucellar cells during degeneration)
Length = 432
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWV 532
YY +++IG PP+ F + DTGS WV
Sbjct: 67 YYVLLNIGNPPKLFDLDIDTGSDLTWV 93
>At1g77480.1 68414.m09022 nucellin protein, putative similar to
nucellin GB:AAB96882 GI:2290202 [Hordeum vulgare]
(nucellin: similar to aspartic protease and its specific
expression in nucellar cells during degeneration)
Length = 466
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWV 532
YY +++IG PP+ F + DTGS WV
Sbjct: 67 YYVLLNIGNPPKLFDLDIDTGSDLTWV 93
>At2g39710.1 68415.m04872 aspartyl protease family protein contains
profile Pfam PF00026: Eukaryotic aspartyl protease;
contains Prosite PS00141: Eukaryotic and viral aspartyl
proteases active site.;
Length = 442
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKK 544
+++G PPQ+ +V DTGS W+ KK
Sbjct: 69 LAVGDPPQNISMVLDTGSELSWLHCKK 95
>At1g09750.1 68414.m01094 chloroplast nucleoid DNA-binding
protein-related contains Pfam profile PF00026:
Eukaryotic aspartyl protease;b similar to CND41,
chloroplast nucleoid DNA binding protein (GI:2541876)
[Nicotiana tabacum]
Length = 449
Score = 32.7 bits (71), Expect = 0.22
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 419 PEPLSNYLDAQYYGV-ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSR 595
P N L Y V +GTPPQ +V DT + +W+P C + A +++
Sbjct: 92 PVASGNQLHIGNYVVRAKLGTPPQLMFMVLDTSNDAVWLPCSGCSGCSNA---STSFNTN 148
Query: 596 KSKTY 610
S TY
Sbjct: 149 SSSTY 153
>At5g10770.1 68418.m01252 chloroplast nucleoid DNA-binding protein,
putative similar to CND41, chloroplast nucleoid DNA
binding protein [Nicotiana tabacum] GI:2541876; contains
Pfam profile PF00026: Eukaryotic aspartyl protease
Length = 474
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 452 YYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
Y + +GTP ++FDTGS W + C
Sbjct: 132 YIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPC 163
>At2g28220.1 68415.m03426 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 756
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +2
Query: 410 GPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYD 589
G SP + Y + Y + +GTPP DTGS +W C N +D
Sbjct: 407 GASPYADTLYDYSIYLMKLQVGTPPFEIVAEIDTGSDIIWTQCMPC--PNCYSQFAPIFD 464
Query: 590 SRKSKTY 610
KS T+
Sbjct: 465 PSKSSTF 471
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 395 KYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
K + G SP + + Y + +GTPP DTGS +W C
Sbjct: 63 KNQLQGASPYADTLFDYNIYLMKLQVGTPPFEIAAEIDTGSDLIWTQCMPC 113
>At5g37540.1 68418.m04521 aspartyl protease family protein weak
similarity to CND41, chloroplast nucleoid DNA binding
protein [Nicotiana tabacum] GI:2541876; contains Prosite
PS00141: Eukaryotic and viral aspartyl proteases active
site; contains 1 predicted transmembrane domain
Length = 442
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKKCH 550
+ IGTP QS ++V DTGS W+ +CH
Sbjct: 84 LPIGTPSQSQELVLDTGSQLSWI---QCH 109
>At2g28030.1 68415.m03397 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 392
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +2
Query: 395 KYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLL 574
K + G SP + + Y + +GTPP + DTGS +W C TN
Sbjct: 42 KNQLQGASPYADTLFDYNIYLMKLQVGTPPFEIEAEIDTGSDLIWTQCMPC--TNCYSQY 99
Query: 575 HNKYDSRKSKTY 610
+D S T+
Sbjct: 100 APIFDPSNSSTF 111
>At2g03200.1 68415.m00273 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 461
Score = 31.1 bits (67), Expect = 0.68
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
+SIG P + + DTGS +W K C
Sbjct: 111 LSIGNPAVKYSAIVDTGSDLIWTQCKPC 138
>At4g33490.1 68417.m04756 nucellin protein, putative similar to
nucellin GI:2290202 from [Hordeum vulgare]
Length = 425
Score = 30.7 bits (66), Expect = 0.90
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 452 YYGV-ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACL 571
YY V I+IG PP+ + + DTGS W+ +C + CL
Sbjct: 59 YYNVTINIGQPPRPYYLDLDTGSDLTWL---QCDAPCVRCL 96
>At3g54400.1 68416.m06015 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 425
Score = 30.7 bits (66), Expect = 0.90
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 467 SIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKT 607
+IGTP Q V DT + W+P C + C +D KS +
Sbjct: 93 NIGTPAQPMLVALDTSNDAAWIPCSGC----VGCSSSVLFDPSKSSS 135
>At5g07030.1 68418.m00796 aspartyl protease family protein contains
Pfam profile:PF00026 eukaryotic aspartyl protease
Length = 439
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 470 IGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTY 610
IGTP Q + DT S W+P C + C + + KS ++
Sbjct: 105 IGTPAQPLLLAMDTSSDVAWIPCSGC----VGCPSNTAFSPAKSTSF 147
>At4g30030.1 68417.m04273 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 424
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 446 AQYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
A + ISIG PP ++ DTGS W+ C
Sbjct: 76 AAFLANISIGNPPVPQLLLIDTGSDLTWIHCLPC 109
>At1g66680.1 68414.m07579 S locus-linked protein, putative similar
to S locus-linked protein SLL2 [Brassica napus]
GI:1518113
Length = 358
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -3
Query: 209 ELNIYCDKFLIKKNILDLGK-NGFLFQRTAYE 117
E+N DK+L N+LDLG NG L + A E
Sbjct: 159 EVNDQADKYLSSWNVLDLGTGNGLLLHQLAKE 190
>At1g52190.1 68414.m05889 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 607
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNKYDSRKSKTYVAN 619
+S+ SF + S + PS+K + N ACL+ N+ + S + N
Sbjct: 264 LSLPDHHDSFDCYYHMKDSEIKAPSQKLRFLNKACLISNREEEIGSDGFALN 315
>At1g03220.1 68414.m00300 extracellular dermal glycoprotein,
putative / EDGP, putative similar to extracellular
dermal glycoprotein EDGP precursor [Daucus carota]
GI:285741
Length = 433
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKK 544
QY VI+ TP VVFD G LWV K
Sbjct: 43 QYTTVINQRTPLVPASVVFDLGGRELWVDCDK 74
>At4g30040.1 68417.m04274 aspartyl protease family contains Pfam
domain, PF00026: eukaryotic aspartyl protease
Length = 427
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 464 ISIGTPPQSFKVVFDTGSSNLWVPSKKCHYTNIACLLHNK--YDSRKSKTYVANGTQFAI 637
ISIG+PP + + DT S LW+ C I C + +D +S T+ N T
Sbjct: 89 ISIGSPPITQLLHMDTASDLLWIQCLPC----INCYAQSLPIFDPSRSYTH-RNETCRTS 143
Query: 638 QYGSGSL 658
QY SL
Sbjct: 144 QYSMPSL 150
>At1g25510.1 68414.m03168 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 483
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 449 QYYGVISIGTPPQSFKVVFDTGSSNLWVPSKKC 547
+Y+ + IG P + +V DTGS W+ C
Sbjct: 147 EYFTRVGIGKPAREVYMVLDTGSDVNWLQCTPC 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,755,757
Number of Sequences: 28952
Number of extensions: 307431
Number of successful extensions: 862
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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