Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0848
         (570 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g24310.1 68417.m03490 expressed protein contains Pfam profile...    28   5.0  
At5g50130.1 68418.m06209 short-chain dehydrogenase/reductase (SD...    27   6.7  
At4g31830.1 68417.m04523 expressed protein                             27   6.7  
At3g53350.3 68416.m05888 myosin heavy chain-related low similari...    27   8.8  
At3g53350.2 68416.m05887 myosin heavy chain-related low similari...    27   8.8  
At3g53350.1 68416.m05886 myosin heavy chain-related low similari...    27   8.8  
At1g71530.2 68414.m08270 protein kinase family protein contains ...    27   8.8  
At1g71530.1 68414.m08269 protein kinase family protein contains ...    27   8.8  
At1g07840.2 68414.m00851 leucine zipper factor-related similar t...    27   8.8  
At1g07840.1 68414.m00850 leucine zipper factor-related similar t...    27   8.8  

>At4g24310.1 68417.m03490 expressed protein contains Pfam profile
           PF05078: Protein of unknown function (DUF679)
          Length = 213

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 411 VPMGVEKVGDRLFITVPRRRYGI 479
           VPMGV  +   LF+  P RR+GI
Sbjct: 180 VPMGVGVICGMLFLVFPARRHGI 202


>At5g50130.1 68418.m06209 short-chain dehydrogenase/reductase (SDR)
           family protein contains INTERPRO family IPR002198
           Short-chain dehydrogenase/reductase (SDR) superfamily
          Length = 339

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 458 DCNEQSVANLFNAHWHIVILNEESSCFVLDRLHEW 354
           DCNE + ++L N  +  + L  +S   + D LHE+
Sbjct: 294 DCNETNCSDLANDEYVALKLCTQSRALIHDHLHEF 328


>At4g31830.1 68417.m04523 expressed protein 
          Length = 100

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -3

Query: 535 AGDRVLESVVRST*FNVDGIPYLRLGTVMNNLSPTFSTPIGTLLY*TKNLPVSFSTGFTN 356
           AG+        +T  + +G+   +   V ++  P  S P G +L+  +NLP S++T    
Sbjct: 2   AGEEDWRKTADTTKMSSEGV---KAAGVESSKRPPGSNP-GGVLHQRRNLPYSYTTMALA 57

Query: 355 GLTISG 338
           GL ISG
Sbjct: 58  GLAISG 63


>At3g53350.3 68416.m05888 myosin heavy chain-related low similarity
           to filamin-interacting protein S-FILIP [Rattus
           norvegicus] GI:21392397, nonmuscle heavy chain myosin
           II-A [Mus musculus] GI:17978023
          Length = 394

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 23/90 (25%), Positives = 37/90 (41%)
 Frame = +2

Query: 122 SVDEQESREINRSVRLEATDL*HTRKPVFRRSIRY*H*QKEETN*QRIQTRQSESAIKSR 301
           S    E  E+  ++ L   ++   +  V     RY     + T   R    Q+E A+KSR
Sbjct: 204 SSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTE-AVKSR 262

Query: 302 RSTPQAELESIQTRNRETIREACRERNRKI 391
            S  +AEL     R ++ I    +E   K+
Sbjct: 263 YSQREAELTEELNRTKDEIEGLRKELMEKV 292


>At3g53350.2 68416.m05887 myosin heavy chain-related low similarity
           to filamin-interacting protein S-FILIP [Rattus
           norvegicus] GI:21392397, nonmuscle heavy chain myosin
           II-A [Mus musculus] GI:17978023
          Length = 394

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 23/90 (25%), Positives = 37/90 (41%)
 Frame = +2

Query: 122 SVDEQESREINRSVRLEATDL*HTRKPVFRRSIRY*H*QKEETN*QRIQTRQSESAIKSR 301
           S    E  E+  ++ L   ++   +  V     RY     + T   R    Q+E A+KSR
Sbjct: 204 SSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTE-AVKSR 262

Query: 302 RSTPQAELESIQTRNRETIREACRERNRKI 391
            S  +AEL     R ++ I    +E   K+
Sbjct: 263 YSQREAELTEELNRTKDEIEGLRKELMEKV 292


>At3g53350.1 68416.m05886 myosin heavy chain-related low similarity
           to filamin-interacting protein S-FILIP [Rattus
           norvegicus] GI:21392397, nonmuscle heavy chain myosin
           II-A [Mus musculus] GI:17978023
          Length = 396

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 23/90 (25%), Positives = 37/90 (41%)
 Frame = +2

Query: 122 SVDEQESREINRSVRLEATDL*HTRKPVFRRSIRY*H*QKEETN*QRIQTRQSESAIKSR 301
           S    E  E+  ++ L   ++   +  V     RY     + T   R    Q+E A+KSR
Sbjct: 206 SSSSMEVEELKEAMNLSRQEITQLKSAVEAAETRYQEEYIQSTLQIRSAYEQTE-AVKSR 264

Query: 302 RSTPQAELESIQTRNRETIREACRERNRKI 391
            S  +AEL     R ++ I    +E   K+
Sbjct: 265 YSQREAELTEELNRTKDEIEGLRKELMEKV 294


>At1g71530.2 68414.m08270 protein kinase family protein contains
           Serine/Threonine protein kinases active-site signature,
           PROSITE:PS00108
          Length = 463

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 297 RGDLPLRPSWNLFRPEIVRPFVKPVENETGRFFVQYNNVPMGVEKVGDRLFITVPRRRYG 476
           R  LPL  S   F+P    P+ KPV  ET      +N+ P     + ++L    P +R  
Sbjct: 374 RATLPLATS---FKPS--HPY-KPVLAET------FNHFPSSALMLINKLLAIEPEKRGS 421

Query: 477 IPSTLNYVDLTTDSNTRSPALRP-YPSLRE 563
             STL     TT+    +P+  P YP  +E
Sbjct: 422 AASTLRSEFFTTEPLPANPSNLPRYPPSKE 451


>At1g71530.1 68414.m08269 protein kinase family protein contains
           Serine/Threonine protein kinases active-site signature,
           PROSITE:PS00108
          Length = 463

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 297 RGDLPLRPSWNLFRPEIVRPFVKPVENETGRFFVQYNNVPMGVEKVGDRLFITVPRRRYG 476
           R  LPL  S   F+P    P+ KPV  ET      +N+ P     + ++L    P +R  
Sbjct: 374 RATLPLATS---FKPS--HPY-KPVLAET------FNHFPSSALMLINKLLAIEPEKRGS 421

Query: 477 IPSTLNYVDLTTDSNTRSPALRP-YPSLRE 563
             STL     TT+    +P+  P YP  +E
Sbjct: 422 AASTLRSEFFTTEPLPANPSNLPRYPPSKE 451


>At1g07840.2 68414.m00851 leucine zipper factor-related similar to
           charged amino acid rich leucine zipper factor-1
           (GI:12061569) {Mus musculus}
          Length = 312

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 336 RPEIVRPFVKPVENETGRFFVQYNNVPMGVEKVGDRLFITVPRRR 470
           RPE +R +     NE  RF  QY       +K  + LF   PR +
Sbjct: 217 RPEEIRDYYGVESNEQKRFMAQYER----QQKAEEELFTRAPRTK 257


>At1g07840.1 68414.m00850 leucine zipper factor-related similar to
           charged amino acid rich leucine zipper factor-1
           (GI:12061569) {Mus musculus}
          Length = 312

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 336 RPEIVRPFVKPVENETGRFFVQYNNVPMGVEKVGDRLFITVPRRR 470
           RPE +R +     NE  RF  QY       +K  + LF   PR +
Sbjct: 217 RPEEIRDYYGVESNEQKRFMAQYER----QQKAEEELFTRAPRTK 257


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,949,784
Number of Sequences: 28952
Number of extensions: 206539
Number of successful extensions: 554
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)