Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0844
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 163 1e-40
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 163 1e-40
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical pr... 27 7.5
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 27 9.9
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 163 bits (395), Expect = 1e-40
Identities = 71/136 (52%), Positives = 99/136 (72%)
Frame = +3
Query: 120 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 299
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L E +DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVE--RDWSDHALW 61
Query: 300 WPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVI 479
WP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++DFS+++F A
Sbjct: 62 WPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARVDFSVNSFKATK 121
Query: 480 QLCKNLGIRHSEELSL 527
+LC++LGIR+SEELSL
Sbjct: 122 KLCRDLGIRYSEELSL 137
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 163 bits (395), Expect = 1e-40
Identities = 71/136 (52%), Positives = 99/136 (72%)
Frame = +3
Query: 120 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKDWSDHALW 299
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L E +DWSDHALW
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVE--RDWSDHALW 61
Query: 300 WPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVI 479
WP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++DFS+++F A
Sbjct: 62 WPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARVDFSVNSFKATK 121
Query: 480 QLCKNLGIRHSEELSL 527
+LC++LGIR+SEELSL
Sbjct: 122 KLCRDLGIRYSEELSL 137
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 117 MLADGEIVGDGSWNLTIYVTDLNEK 191
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 117 MLADGEIVGDGSWNLTIYVTDLNEK 191
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 322 SPDQNTPWTSTEFTRTPPYTSRPCTNH 402
S ++ W+ + R PP SRPC H
Sbjct: 147 STGKSVQWSQCDARRRPPEKSRPCNQH 173
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 322 SPDQNTPWTSTEFTRTPPYTSRPCTNH 402
S ++ W+ + R PP SRPC H
Sbjct: 481 STGKSVQWSQCDARRRPPEKSRPCNQH 507
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 58 CESKLF*NHVRRCPSCRIP 2
C SKLF N +CP+CR P
Sbjct: 33 CASKLFENPEVKCPTCRQP 51
>U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical
protein C44C1.4a protein.
Length = 547
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 135 IVGDGSWNLTIYVTDLNEKRTMVVKGD-MHIGGVMLKLTESFGKEF 269
IVG ++ YV LNEKR G + + G + T+SF +EF
Sbjct: 491 IVGGATYEEAAYVRSLNEKRMQGYGGPAVVLAGSSMLNTKSFLEEF 536
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +3
Query: 153 WNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKD 278
WN Y T+ EK+T++VK + + K E +E +++
Sbjct: 988 WNSLAYATEYEEKQTIIVKKIQQLRDLNQKSIEDQERETREN 1029
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,639
Number of Sequences: 27780
Number of extensions: 272677
Number of successful extensions: 799
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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