Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0843
(512 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA... 32 0.40
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 29 2.8
BT001864-1|AAN71631.1| 550|Drosophila melanogaster RH70633p pro... 29 2.8
AE014296-1969|AAF50052.1| 537|Drosophila melanogaster CG11711-P... 29 2.8
AE014296-1968|AAN11874.2| 728|Drosophila melanogaster CG11711-P... 29 2.8
AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-P... 29 2.8
AE014296-1966|AAN11873.1| 431|Drosophila melanogaster CG11711-P... 29 2.8
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA... 29 3.7
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 4.9
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 4.9
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 4.9
AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10... 29 4.9
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB... 29 4.9
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA... 29 4.9
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 4.9
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 4.9
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 4.9
AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-P... 29 4.9
AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p pro... 28 6.5
AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA... 28 6.5
>AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA
protein.
Length = 588
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 236 PLRGQNQDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 346
PL +N EV PR++L+P +A P A+P P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 57 QKGDTGYPGLNGTDGPVGAPGERGFTGP 84
>BT001864-1|AAN71631.1| 550|Drosophila melanogaster RH70633p
protein.
Length = 550
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 282 DRGSPPTSSWF*PRRGSDVGCKSAGES-FSGWVLKSLGPRSAHNTMQTVESHIPRAPLLR 106
D +PP + P G+ GCK AG S G +L L +T + S +P+A
Sbjct: 415 DAVAPPICTQ--PEAGA--GCKPAGSSGLLGGILGDLTSGEFGDTTRYCTSAVPQAAAAA 470
Query: 105 GDLVGGSAL 79
G VGG+A+
Sbjct: 471 GAGVGGTAI 479
>AE014296-1969|AAF50052.1| 537|Drosophila melanogaster CG11711-PB,
isoform B protein.
Length = 537
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 282 DRGSPPTSSWF*PRRGSDVGCKSAGES-FSGWVLKSLGPRSAHNTMQTVESHIPRAPLLR 106
D +PP + P G+ GCK AG S G +L L +T + S +P+A
Sbjct: 386 DAVAPPICTQ--PEAGA--GCKPAGSSGLLGGILGDLTSGEFGDTTRYCTSAVPQAAAAA 441
Query: 105 GDLVGGSAL 79
G VGG+A+
Sbjct: 442 GAGVGGTAI 450
>AE014296-1968|AAN11874.2| 728|Drosophila melanogaster CG11711-PA,
isoform A protein.
Length = 728
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 282 DRGSPPTSSWF*PRRGSDVGCKSAGES-FSGWVLKSLGPRSAHNTMQTVESHIPRAPLLR 106
D +PP + P G+ GCK AG S G +L L +T + S +P+A
Sbjct: 577 DAVAPPICTQ--PEAGA--GCKPAGSSGLLGGILGDLTSGEFGDTTRYCTSAVPQAAAAA 632
Query: 105 GDLVGGSAL 79
G VGG+A+
Sbjct: 633 GAGVGGTAI 641
>AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-PD,
isoform D protein.
Length = 566
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 282 DRGSPPTSSWF*PRRGSDVGCKSAGES-FSGWVLKSLGPRSAHNTMQTVESHIPRAPLLR 106
D +PP + P G+ GCK AG S G +L L +T + S +P+A
Sbjct: 415 DAVAPPICTQ--PEAGA--GCKPAGSSGLLGGILGDLTSGEFGDTTRYCTSAVPQAAAAA 470
Query: 105 GDLVGGSAL 79
G VGG+A+
Sbjct: 471 GAGVGGTAI 479
>AE014296-1966|AAN11873.1| 431|Drosophila melanogaster CG11711-PC,
isoform C protein.
Length = 431
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 282 DRGSPPTSSWF*PRRGSDVGCKSAGES-FSGWVLKSLGPRSAHNTMQTVESHIPRAPLLR 106
D +PP + P G+ GCK AG S G +L L +T + S +P+A
Sbjct: 280 DAVAPPICTQ--PEAGA--GCKPAGSSGLLGGILGDLTSGEFGDTTRYCTSAVPQAAAAA 335
Query: 105 GDLVGGSAL 79
G VGG+A+
Sbjct: 336 GAGVGGTAI 344
>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
protein.
Length = 1976
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 466 RVPTRQAGSGPAGYSGTPAAPSGRPDGLP 380
R PTR G+G +G S P+ P +P P
Sbjct: 329 RKPTRTPGTGSSGGSSKPSKPKRKPTSKP 357
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>AL133503-6|CAB72241.1| 1009|Drosophila melanogaster EG:BACH48C10.4
protein.
Length = 1009
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 296 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 475
+G A P ++ P EGSE S G RR CP PRW R +A
Sbjct: 707 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 764
Query: 476 RP 481
+P
Sbjct: 765 QP 766
>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
isoform B protein.
Length = 1535
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 296 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 475
+G A P ++ P EGSE S G RR CP PRW R +A
Sbjct: 1162 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 1219
Query: 476 RP 481
+P
Sbjct: 1220 QP 1221
>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
isoform A protein.
Length = 1395
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 296 DGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSLPGRDAIHR 475
+G A P ++ P EGSE S G RR CP PRW R +A
Sbjct: 1022 NGKADPPESTHPAPVAA-EGSELPGCSASTIDGCARRTH-CPNAPRWMRPKPKAGNAAGP 1079
Query: 476 RP 481
+P
Sbjct: 1080 QP 1081
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 109 QKGRAGYVRLNGLHGVVSRPRAQGF*DP 192
QKG GY LNG G V P +GF P
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-PA
protein.
Length = 1056
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/81 (28%), Positives = 31/81 (38%)
Frame = +2
Query: 161 ADRGPKDFRTHPLNDSPALLHPTSDPLRGQNQDEVGGLPRSTLQPDGAAHPKDAQPTEPS 340
AD PKD + + + ++ T PL N + +P D +P D P P
Sbjct: 723 ADNTPKDSSSSGSSSTTTFVNTTPSPLDAGNPFDSATIPAWLRDFD---YP-DVGPGVPF 778
Query: 341 RRIEGSETSAVSVRQPVGPPR 403
SA S R P PPR
Sbjct: 779 DPDNFGTASASSTRNPTNPPR 799
>AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p
protein.
Length = 1150
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 448 AGSGPAGYSGTPAAPSG 398
AG GP G SGTP P G
Sbjct: 537 AGGGPGGPSGTPGRPGG 553
>AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA
protein.
Length = 1150
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 448 AGSGPAGYSGTPAAPSG 398
AG GP G SGTP P G
Sbjct: 537 AGGGPGGPSGTPGRPGG 553
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,501,943
Number of Sequences: 53049
Number of extensions: 583718
Number of successful extensions: 3116
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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