Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0842
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.53 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.70 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.8  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +1

Query: 169 NVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSH-EVPERSSHSTNL 345
           +V ++I+  K+ G   T   SE  K+ + + +    + L    ALS  + P    H  ++
Sbjct: 245 SVDDVIEKGKRPGAFRTTLGSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGVEHFEDV 304

Query: 346 VDSTAETDVYITRPHD-DIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQT 522
           V             H+ D+   M E++   ++I      N+D  VAL++  E + + +Q 
Sbjct: 305 VHKKCSNFTLPEIQHNLDVLVDMCEQDI--IRIDRNTRFNQDKIVALRQEQETLKSQVQR 362

Query: 523 E 525
           E
Sbjct: 363 E 363


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
 Frame = +1

Query: 262 STENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDV----YITRPHDDIKTKMSEEERK 429
           S +  KP+Q        VPE+S+ +T    + + T+      ++ P +++   ++ +E K
Sbjct: 420 SADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPPAPAVSNPQNEVDGSVAPKECK 479


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +1

Query: 202 AGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDS 354
           AGQ     LS  +    + W T +  PL  G+      P     ST+ + S
Sbjct: 169 AGQYPYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPS 219


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +1

Query: 202 AGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDS 354
           AGQ     LS  +    + W T +  PL  G+      P     ST+ + S
Sbjct: 61  AGQYPYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLPS 111


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 150 SDDKYWKC 173
           S DKYWKC
Sbjct: 37  SCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 150 SDDKYWKC 173
           S DKYWKC
Sbjct: 37  SCDKYWKC 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,675
Number of Sequences: 336
Number of extensions: 2884
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)