Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0842
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17405| Best HMM Match : DUF433 (HMM E-Value=2.1) 32 0.34
SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_12033| Best HMM Match : Ribosomal_L29 (HMM E-Value=7.9) 30 1.4
SB_1077| Best HMM Match : rve (HMM E-Value=2.1e-17) 30 1.8
SB_28931| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 28 7.4
SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4) 27 9.7
SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36) 27 9.7
SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21) 27 9.7
SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7) 27 9.7
>SB_17405| Best HMM Match : DUF433 (HMM E-Value=2.1)
Length = 284
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFL 567
HDD+K +MS EE +N K +K ++ +E ++ AL+T+ + L
Sbjct: 85 HDDVKQRMSAEEVRN-KADIKAILHNYGAELSEERIKECIKALKTKKFSKLEFCLRHPIL 143
Query: 568 NTVEAGNEAD 597
VE E +
Sbjct: 144 ALVERLGEVE 153
>SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/95 (26%), Positives = 39/95 (41%)
Frame = +1
Query: 154 TINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSH 333
TIN LI+ K ++ + L E K +L W +E GK S L ++ +R
Sbjct: 136 TINRKGETPLINALKSERTDIADILLEIGKASLQVWDSETGK---TASELRKDIIKRRKR 192
Query: 334 STNLVDSTAETDVYITRPHDDIKTKMSEEERKNLK 438
+ S +V RP K K ++ + N K
Sbjct: 193 RPFSIPSAFLREVGDVRPKRGNKEKKNKVKSANTK 227
>SB_12033| Best HMM Match : Ribosomal_L29 (HMM E-Value=7.9)
Length = 69
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTE 525
HDD+K +MS EE +N K +K ++ +E ++ AL+T+
Sbjct: 8 HDDVKQRMSAEEVRN-KADMKAILHNYGAELSEERMKEYMKALKTK 52
>SB_1077| Best HMM Match : rve (HMM E-Value=2.1e-17)
Length = 794
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFL 567
HDD+K MS EE K + + + +T AL +S + T L IDNV+ ++ D +
Sbjct: 64 HDDVKR-MSAEEVKKYEKRYETALASRTTDALADSFLKLTTKLVGMPIDNVV-DFHNDLV 121
Query: 568 NTVEAGNE 591
+ NE
Sbjct: 122 SDYIINNE 129
>SB_28931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1035
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFL 567
HDD+K MS EE K + + + +T AL +S + T L IDNV+ ++ D +
Sbjct: 238 HDDVKR-MSAEEVKKYEKRYETALASRTTDALADSFLKLTTKLVGMPIDNVV-DFHNDLV 295
Query: 568 NTVEAGNE 591
+ NE
Sbjct: 296 SDYIINNE 303
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 274 GKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDDIKTKMSEEE 423
G+PL GSA H E +L DST TDV P ++ + EEE
Sbjct: 945 GEPLLEGSASEHVSGENRHDIPDLDDSTGSTDV---GPTEEAVEEEKEEE 991
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/103 (24%), Positives = 39/103 (37%)
Frame = +1
Query: 214 VTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHD 393
+T EL + + + S E + L H+ T LV T +++
Sbjct: 721 MTAELPDDVLIERSLKKEEVVQRLTQLPGRLHKFTSIDIGDTTLVKGTVPAQLFVKEGAS 780
Query: 394 DIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQT 522
I +E +NL G I I++DS + E VF QT
Sbjct: 781 VILIWNQSQELRNLTSGTVIGISDDSILVQFEGKGPVFVLRQT 823
>SB_49457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +1
Query: 205 GQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITR 384
G+N E +ES SE S ++GK GS S++ E S ++ D TD
Sbjct: 779 GRNTDEGSNESNDEEQSEASKDDGKNTDEGSYESND--EEQSEASK--DDGKNTDEGSYE 834
Query: 385 PHDDIKTKMSEEERKN 432
+D+ +++ S+++ KN
Sbjct: 835 SNDEEQSEASKDDGKN 850
>SB_1527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 28.3 bits (60), Expect = 5.6
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = +1
Query: 205 GQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITR 384
G ++EE + L G+P Q S + ++ S LV S ++ I
Sbjct: 581 GAELSEEKMKEYMKALKTKKFSKGEP-QISSRWTARRSQQKSKLAILVASGKSREMVIKA 639
Query: 385 -PHDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTAL--QTEYIDNVILSYN 555
HDD+K +EE RK K + + +T AL + + T L T ID+VI +N
Sbjct: 640 LTHDDVKRMSAEEVRKYEK-RYETALASRTTDALADGFLKLTTKLVGMTLPIDSVIDLHN 698
Query: 556 PDFLNTVEAGNE 591
D ++ NE
Sbjct: 699 -DLVSDYIINNE 709
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +3
Query: 399 QNENERGGEKESEDWRQDLHQ*RQHGCIKGVT*KCIHSFTNGVHRQRDPLIQSGFLEHSG 578
+ E ER E+E E R+ + +++ C+ + + S NG + D LE S
Sbjct: 253 ERERERERERERERERERERERKRYACVSETSTRGEPSNLNGSDKCIDLFGDLPPLESSE 312
Query: 579 GRQRSRSKE*LFSQNVAYLA 638
R R E + NV LA
Sbjct: 313 SRGEKRKAEEISKDNVKKLA 332
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 427 KNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFL 567
K LKIG+ + N+ + L N A++ Y++NV++ + L
Sbjct: 502 KVLKIGMNMIQNKGANALLDAMRNNAECAMEKVYLNNVVIDVETNHL 548
>SB_44762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 892
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Frame = +1
Query: 241 KLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRP--HDDIKTKMS 414
+L+ + EN K L+ E R ++ LV+ E + + + HDD K +
Sbjct: 439 ELSEEKMKDENMKALKTKKFSKLEFCLRHPYTIALVERLGEVERMVGKALTHDDGKRMSA 498
Query: 415 EEERKNLKIGVKIFINEDSTVALKESLENVFTAL--QTEYIDNVILSYNPDFLNTVEAGN 588
EE RKN K + + +T AL +S + T L ID+V+ +N D ++ N
Sbjct: 499 EEVRKNEK-RYENALASRTTDALADSFLKLTTKLVGMALPIDSVVDLHN-DLVSDYIINN 556
Query: 589 E 591
E
Sbjct: 557 E 557
>SB_24571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDN 537
HDD+K +EE RK K + + +T AL +S+ ++ L ++YI N
Sbjct: 8 HDDVKRMSAEEVRKYEK-RYETALASRTTDALADSVVDLHNDLVSDYIIN 56
>SB_58789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 619 WLNNYSLDLLRCRPPLCSRNPDCMRGSRCLCTPFVKL 509
WL Y D+L+CR P P M GS C KL
Sbjct: 316 WLLRYMEDILKCRRPGKYTVPSKMPGSYRTCGTHEKL 352
>SB_23458| Best HMM Match : MCPVI (HMM E-Value=1.4)
Length = 770
Score = 27.5 bits (58), Expect = 9.7
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 388 HDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTAL--QTEYIDNVILSYNPD 561
HDD+K +EE RK K K + +T AL +S + T L T ID+V+ +N D
Sbjct: 58 HDDVKRMSAEEVRKYEK-RYKTTLASRTTDALADSFLKLTTKLVGMTLPIDSVVDLHN-D 115
Query: 562 FLNTVEAGNE 591
++ NE
Sbjct: 116 LVSDYIINNE 125
>SB_9496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2309
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 397 IKTKMSEEERKNLKIGVKIFINEDSTV-ALKESLENVFTALQTEY-IDNVILSYNPD 561
IKT S ++ L++ +E+ T + FT +++ +DNV++ YNPD
Sbjct: 566 IKTAPSPQDVTQLRLTTSSSTSEEGTKWCWSAKCQKAFTNVKSMITVDNVLVPYNPD 622
>SB_49747| Best HMM Match : RVT_1 (HMM E-Value=2.1e-36)
Length = 877
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 397 IKTKMSEEERKNLKIGVKIFINEDSTV-ALKESLENVFTALQTEY-IDNVILSYNPD 561
IKT S ++ L++ +E+ T + FT +++ +DNV++ YNPD
Sbjct: 349 IKTAPSPQDVTQLRLTTSSSTSEEGTKWCWSAKCQKAFTNVKSMITVDNVLVPYNPD 405
>SB_38344| Best HMM Match : PX (HMM E-Value=8.1e-21)
Length = 632
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 190 IKKKAGQNVTEELSESIK-LTLSEWSTENGKPLQN----GSALSHEVPERSSHSTNLVDS 354
IK G + ++ ES+ +T +E E K + G L+ PER+S
Sbjct: 500 IKTTYGDRINRKIVESVNWMTSAEQIAEYVKMFRESFWPGGVLAESAPERASDIKLRTRV 559
Query: 355 TAETDVYITRPHDDIKTKMSEE 420
A+T +Y + P DD+K + E
Sbjct: 560 AAKTKMYGSIP-DDLKRFLGTE 580
>SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7)
Length = 577
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 190 IKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDST 357
+ +K + + + + S K LS WS N K +HE E S+ T L D T
Sbjct: 222 LDRKRSKPLPDVIQISSKSRLSGWSKPNAKVKSKHELAAHE--ENSTFQTRLRDKT 275
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,122,125
Number of Sequences: 59808
Number of extensions: 364882
Number of successful extensions: 1255
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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