Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0842
(638 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13330.1 68414.m01547 expressed protein similar to nuclear re... 31 0.65
At1g66130.1 68414.m07505 oxidoreductase N-terminal domain-contai... 30 1.5
At5g01670.1 68418.m00083 aldose reductase, putative similar to a... 29 2.0
At4g31880.1 68417.m04531 expressed protein 29 2.0
At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive eff... 29 2.6
At4g00440.1 68417.m00061 expressed protein 29 2.6
At3g55220.1 68416.m06133 splicing factor, putative contains CPSF... 29 2.6
At3g55200.1 68416.m06131 splicing factor, putative contains CPSF... 29 2.6
At3g28770.1 68416.m03591 expressed protein 29 3.4
At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-conta... 29 3.4
At4g29250.1 68417.m04183 transferase family protein low similari... 28 4.5
At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR... 28 6.0
At5g55960.1 68418.m06979 expressed protein 27 7.9
At3g05940.1 68416.m00676 expressed protein contains Pfam profile... 27 7.9
At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)... 27 7.9
At1g71015.1 68414.m08194 expressed protein 27 7.9
>At1g13330.1 68414.m01547 expressed protein similar to nuclear
receptor coactivator GT198 (GI:16506273) {Rattus
norvegicus}; similar to TBP-1 interacting protein
(GI:7328534) [Homo sapiens]
Length = 226
Score = 31.1 bits (67), Expect = 0.65
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Frame = +1
Query: 154 TINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTEN---GKPLQNGSALSHEVPER 324
T N + L ++KK A Q + L+++ K+T E+ + + Q S E+ +
Sbjct: 25 TQNAADALQKFNLKKTAVQKALDSLADAGKITFKEYGKQKIYIARQDQFEIPNSEELAQM 84
Query: 325 SSHSTNLVDSTAETDVYITRPHDDIKTKMS-----EEERKNLKIGVKIFINEDSTVALKE 489
+ L + E I+ +IK+ S E + K+ K+ ++ E+ V L+E
Sbjct: 85 KEDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEEIQEKDAKLRKEVKEMEEKLVKLRE 144
Query: 490 SL 495
+
Sbjct: 145 GI 146
>At1g66130.1 68414.m07505 oxidoreductase N-terminal
domain-containing protein similar to AX110P [Daucus
carota] GI:285739; contains Pfam profile PF01408:
Oxidoreductase family NAD-binding Rossmann fold
Length = 364
Score = 29.9 bits (64), Expect = 1.5
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Frame = +1
Query: 154 TINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHE-VPERSS 330
T+ G +L I K + VTE S ++ + +S+ S E K G+ LS E V S
Sbjct: 6 TVRFG-LLGCIRFASKFVRTVTES-SNAVIIAISDPSLETAKTFATGNNLSPETVTIYGS 63
Query: 331 HSTNLVDSTAETDVYITRPHDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFT 510
+ L D+ + VY+T P K + V+ +D+T LE +
Sbjct: 64 YEELLNDANVDA-VYLTMPVTQRARWAVTAAEKKKHVLVEKPPAQDAT-----ELEKIVE 117
Query: 511 ALQ---TEYIDNVILSYNPDFLNT----VEAGNEADLRNSYSAKTSPI 633
A + +++D I ++ + ++G D+R+ YS T+P+
Sbjct: 118 ACEYNGVQFMDGTIWLHHQRTVKIRDTMFDSGLLGDVRHMYSTMTTPV 165
>At5g01670.1 68418.m00083 aldose reductase, putative similar to
aldose reductase [Hordeum vulgare][GI:728592], aldose
reductase ALDRXV4 [Xerophyta viscosa][GI:4539944]
Length = 322
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1
Query: 421 ERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSY 552
ER++L + K++ E S ++ +L+N LQ EY+D ++ +
Sbjct: 79 ERRDLFVTSKLWCTELSPERVRPALQNTLKELQLEYLDLYLIHW 122
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +1
Query: 136 QSASKVTINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEV 315
QS K T N + + K + TEE+SE + + + ++GK + + S V
Sbjct: 446 QSVPKKTANQKKKESSTEEVKPSASIATEEVSEEPNTSEPQVTKKSGKKVASSSKTKPTV 505
Query: 316 -PERSSHSTNLVDSTAETDVYITRPHDDIKTKMSEEERK 429
P + S S V +E V + + TK EE++K
Sbjct: 506 PPSKKSTSETKVAKQSEKKV-VGSDNAQESTKPKEEKKK 543
>At5g37160.1 68418.m04461 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 871
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -1
Query: 305 DNADPFCNGFPFSVLHSDRVNL----ILSESSSVTFCPAFFFMSIKFKT 171
D+ DP G+ FSV ++++ +S+S TFC F ++I T
Sbjct: 142 DDLDPLLLGYVFSVYGDSKISVHFSRSISQSEKHTFCTGVFLINITTNT 190
>At4g00440.1 68417.m00061 expressed protein
Length = 831
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/85 (20%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 163 TGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPL-QNGSALSHEVPERSSHST 339
+ + +NL++IKK+ + EE ++ LS+ ++ +P+ + S ++ + +++
Sbjct: 456 SADFINLVNIKKETHASQPEENTDIQVCNLSKEPDDSIQPIASEPNEKSVDIEDETANED 515
Query: 340 NLVDSTAETDVYITRPHDDIKTKMS 414
N+ + + DV I D++ + S
Sbjct: 516 NMFSAGSADDVMIPNELDEVPEEAS 540
>At3g55220.1 68416.m06133 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B
subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 238 IKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDDIKTKMSE 417
+ L L+ S + P+ NG+ + VP + + ++ +Y+ + H D++ +
Sbjct: 212 LDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPR 271
Query: 418 EERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYID--NVILSYNPDFLNTVE 579
+ GV + + A+ + F +QTEY D V L +N D ++ ++
Sbjct: 272 RTDLPAERGVLVV-----SAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELK 322
>At3g55200.1 68416.m06131 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B
subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 238 IKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDDIKTKMSE 417
+ L L+ S + P+ NG+ + VP + + ++ +Y+ + H D++ +
Sbjct: 212 LDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPR 271
Query: 418 EERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYID--NVILSYNPDFLNTVE 579
+ GV + + A+ + F +QTEY D V L +N D ++ ++
Sbjct: 272 RTDLPAERGVLVV-----SAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELK 322
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = +1
Query: 130 MLQSASKVTINTGNVLNLIDIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSH 309
++Q+ S+ I N + K+ G V +E S++I++ +++GK +NG
Sbjct: 1570 LMQADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGG--KE 1627
Query: 310 EVPERSSHSTNLVDSTAETDVYITRPHDDIKT 405
E S +N+V+ + I +D KT
Sbjct: 1628 VSTEEGSKDSNIVERNGGKEDSIKEGSEDGKT 1659
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/84 (22%), Positives = 39/84 (46%)
Frame = +1
Query: 187 DIKKKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAET 366
D +++ + EE S +K E T+ K +N + E ++ H N E
Sbjct: 1042 DSEERKSKKEKEE-SRDLKAKKKEEETKEKKESENHKSKKKE--DKKEHEDNK-SMKKEE 1097
Query: 367 DVYITRPHDDIKTKMSEEERKNLK 438
D + H++ K++ EE++K+++
Sbjct: 1098 DKKEKKKHEESKSRKKEEDKKDME 1121
>At2g26890.1 68415.m03226 DNAJ heat shock N-terminal domain-containing
protein contains Pfam profile PF00226: DnaJ domain
Length = 2554
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 217 TEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETDVYITRPHDD 396
T ++ S+ ++ +++ + Q GS + +VPE+S+ + D +Y+ R D
Sbjct: 2197 TPAMAASLSAQIATMASDIYREQQKGSVIEWDVPEQSAGQQEMRDEPQVGGIYVRRFLKD 2256
Query: 397 IKTKMSEEER 426
K + +R
Sbjct: 2257 PKFPLRNPKR 2266
>At4g29250.1 68417.m04183 transferase family protein low similarity
to CER2 Arabidopsis thaliana GI:1213594, anthocyanin
5-aromatic acyltransferase Gentiana triflora GI:4185599;
contains Pfam profile PF02458 transferase family
Length = 460
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 208 QNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHS 336
+++T+ L + L EW + N + NGS L E SHS
Sbjct: 341 ESITKRLDYDTVMDLIEWLSSNNGAISNGSDLVCTNLENMSHS 383
>At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1123
Score = 27.9 bits (59), Expect = 6.0
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 5/123 (4%)
Frame = +1
Query: 196 KKAGQNVTEELSESIKLTLSEWSTENGKPLQNGSALSHEVPERSSHSTNLVDSTAETD-- 369
KK QN TEE+ K L++ S G +N ++ + + E SSH + T D
Sbjct: 125 KKTCQNQTEEVKNQWKQALTDVSNILGYHSKNCNSEATMIEEISSHILGKLSLTPSNDFE 184
Query: 370 --VYITRPHDDIKTKMSEEERKNLKIGVKIFINEDSTVALKESLENVFTALQTE-YIDNV 540
V I + ++ + E + +G+ T + N+ + Q+ YID
Sbjct: 185 EFVGIKDHIEKVRLLLHLESDEVRMVGIWGTSGIGKTTIARALFSNLSSQFQSSVYIDRA 244
Query: 541 ILS 549
+S
Sbjct: 245 FIS 247
>At5g55960.1 68418.m06979 expressed protein
Length = 648
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 415 EEERKNLKIGVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYN 555
EE KIG+K +++E+ + + F +E ID++ + YN
Sbjct: 290 EESNYAEKIGIKQWMDENDVPGMVDMYTTKFYETVSEQIDSLAMQYN 336
>At3g05940.1 68416.m00676 expressed protein contains Pfam profile
PF03619: Domain of unknown function
Length = 422
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 167 PVFIVTLEALCNIAAI*LLTFKLYQQTL 84
P++++ L LC + AI L F +Y+ L
Sbjct: 6 PIYLIILAFLCTVGAIALALFHIYKHLL 33
>At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)
identical to GB:Q05196 from [Arabidopsis thaliana]
Length = 668
Score = 27.5 bits (58), Expect = 7.9
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +1
Query: 289 NGSALSHEVPERSSHSTNLVDSTAETDVYITRPH-------DDIKTKMSEEERKN-LKI- 441
N SA SH P+RS T L S +D+ + P D + + ++E N K+
Sbjct: 555 NASANSHNAPQRSHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVT 614
Query: 442 GVKIFINEDSTVALKESLENVFTALQTEYIDNVILSYNPDFLNTVE 579
G+ + +++ + L ES E A +E +D + S +P +++V+
Sbjct: 615 GMLLEMDQAEILHLLESPE-ALKAKVSEALDVLRRSADPAAVSSVD 659
>At1g71015.1 68414.m08194 expressed protein
Length = 195
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 190 IKKKAGQNVTEELSESIKLTLSEWSTEN-GKPLQNGSALSHEVPE 321
+KKK N E S+KL L +W E K ++GS S+++ +
Sbjct: 114 MKKKTEVNDEEREVSSVKLKLPKWKIEKLRKESESGSDFSNKITQ 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,790,659
Number of Sequences: 28952
Number of extensions: 256209
Number of successful extensions: 823
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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