Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0840
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 257 THPDRTCRPQCNVYR*FLTLFCP*LFITTGMCLMF 153
           +HP+ T   QC  Y  F T      ++  GM +M+
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLLFGMVMMY 228


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 257 THPDRTCRPQCNVYR*FLTLFCP*LFITTGMCLMF 153
           +HP+ T   QC  Y  F T      ++  GM +M+
Sbjct: 194 SHPNITWYQQCVTYNVFPTYAHELTYLLFGMVMMY 228


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 617 QKSFQFVFGLIFCFSIGIYY 558
           +K   F+F  I   +IG+Y+
Sbjct: 442 RKKLDFIFTFITLLTIGLYF 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,905
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)