Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0840
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr...   107   9e-24
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p...   103   1e-22
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ...   100   7e-22
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z70205-8|CAO78730.1|  270|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z70205-7|CAA94120.2|  996|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AB054992-1|BAB62002.1|  996|Caenorhabditis elegans peroxin protein.    28   6.4  
AC024810-11|AAK68516.2|  165|Caenorhabditis elegans Hypothetical...    27   8.4  

>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
           protein F55B11.1 protein.
          Length = 1358

 Score =  107 bits (256), Expect = 9e-24
 Identities = 54/129 (41%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
 Frame = +2

Query: 248 PDVSLNEFIRNVAELRGTKAMCHEGGCGACVVAVRASLPPNNEMKTFAVNSCLVSILSCH 427
           P ++L  ++R+  +L GTK  C+EGGCGAC + +  S   N E+K F+ NSCL+ +    
Sbjct: 32  PKMTLATYLRDKLKLTGTKIGCNEGGCGACTIMI--SHIENGEIKHFSANSCLMPVCGVF 89

Query: 428 EWEVITVEGIGNKSIG-YHEIQTRLANFNGTQCGFCTPGWVMNMYSIYQSKNKKLSQKQI 604
              V TVEGIG+ +    H +Q RLA  +G+QCGFCTPG+VM MY++ ++ N   +   I
Sbjct: 90  GKAVTTVEGIGSVAKNRLHPVQERLAKAHGSQCGFCTPGFVMAMYALLRN-NPNPTISDI 148

Query: 605 ENSFAGNIC 631
                GN+C
Sbjct: 149 NLGLQGNLC 157


>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
           protein B0222.9 protein.
          Length = 1217

 Score =  103 bits (246), Expect = 1e-22
 Identities = 51/128 (39%), Positives = 77/128 (60%)
 Frame = +2

Query: 248 PDVSLNEFIRNVAELRGTKAMCHEGGCGACVVAVRASLPPNNEMKTFAVNSCLVSILSCH 427
           P+++L  ++RN   LRGTK  C EG CG+C V +       N+    AVN+CLV +   H
Sbjct: 22  PELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDCQNKAVYRAVNACLVPLFHVH 81

Query: 428 EWEVITVEGIGNKSIGYHEIQTRLANFNGTQCGFCTPGWVMNMYSIYQSKNKKLSQKQIE 607
           +  VITVEG+G++    H IQ R+A  +  QCGFC+PG+VM+ Y+++ ++     Q QI 
Sbjct: 82  KTFVITVEGVGSRD-KIHPIQDRMARGHALQCGFCSPGFVMSAYALFSNQPNPTIQ-QIN 139

Query: 608 NSFAGNIC 631
            +   N+C
Sbjct: 140 AAIRANLC 147


>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
           protein F15E6.6 protein.
          Length = 1228

 Score =  100 bits (240), Expect = 7e-22
 Identities = 50/128 (39%), Positives = 78/128 (60%)
 Frame = +2

Query: 248 PDVSLNEFIRNVAELRGTKAMCHEGGCGACVVAVRASLPPNNEMKTFAVNSCLVSILSCH 427
           P+++L  ++RN   LRGTK  C EG CG+C V +       N+    AVN+CLV +   H
Sbjct: 22  PELTLAYYLRNKLGLRGTKLGCEEGVCGSCTVVLGTWDDSLNKAVYSAVNACLVPLFHVH 81

Query: 428 EWEVITVEGIGNKSIGYHEIQTRLANFNGTQCGFCTPGWVMNMYSIYQSKNKKLSQKQIE 607
           +  VITVEG+G++    H IQ R+A  +  QCGFC+PG+VM+ Y++ ++ +   + +QI 
Sbjct: 82  KTFVITVEGVGSRD-KIHPIQDRMARGHAVQCGFCSPGFVMSAYALLRN-HPNPTIEQIN 139

Query: 608 NSFAGNIC 631
            +   N+C
Sbjct: 140 AAIRANLC 147


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 308 MCHEGGCGACVVAVRASLPPNNEMKTFAVNSCLVSI-LSCHEWEVITVEGI 457
           +C  G  G    AV+ SLPP+N  K    +  +++I L    W V T   I
Sbjct: 54  ICPSGYLGIHCEAVKTSLPPDNHFKVGGTSFNIININLYTEYWGVSTYANI 104


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 21/78 (26%), Positives = 27/78 (34%)
 Frame = +2

Query: 308 MCHEGGCGACVVAVRASLPPNNEMKTFAVNSCLVSILSCHEWEVITVEGIGNKSIGYHEI 487
           +CH G CG C V +          K  + N C     SC        E  G  S G H  
Sbjct: 391 ICHSGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGS------ECDGMFSCGIHHC 444

Query: 488 QTRLANFNGTQCGFCTPG 541
             +    +  +CG C  G
Sbjct: 445 TKKC---HDKECGECETG 459


>AL110482-7|CAB54388.1|  106|Caenorhabditis elegans Hypothetical
           protein Y39G8B.9 protein.
          Length = 106

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +2

Query: 521 CGFCTPGWVMNMYSIYQSKN--KKLSQKQIE 607
           CGFC P +V N   + Q+    K+LS+++IE
Sbjct: 71  CGFCHPDYVCNEQCLTQAPRIMKELSKEEIE 101


>Z70205-8|CAO78730.1|  270|Caenorhabditis elegans Hypothetical
           protein C11H1.4b protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 559 IHIHDPSGCTKPTLCTIEISQSSLNFMVTN 470
           I +H PSGC K  L    IS S  NF V N
Sbjct: 39  ILLHGPSGCGKTLLANATISNS--NFSVVN 66


>Z70205-7|CAA94120.2|  996|Caenorhabditis elegans Hypothetical
           protein C11H1.4a protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 559 IHIHDPSGCTKPTLCTIEISQSSLNFMVTN 470
           I +H PSGC K  L    IS S  NF V N
Sbjct: 765 ILLHGPSGCGKTLLANATISNS--NFSVVN 792


>AB054992-1|BAB62002.1|  996|Caenorhabditis elegans peroxin protein.
          Length = 996

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -3

Query: 559 IHIHDPSGCTKPTLCTIEISQSSLNFMVTN 470
           I +H PSGC K  L    IS S  NF V N
Sbjct: 765 ILLHGPSGCGKTLLANATISNS--NFSVVN 792


>AC024810-11|AAK68516.2|  165|Caenorhabditis elegans Hypothetical
           protein Y54E10A.17 protein.
          Length = 165

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +2

Query: 410 SILSCHEWEVITVEGIGNKSIGYHEIQTRLANFNGTQC 523
           S+ +C  W  +T   I + SIGYH            +C
Sbjct: 122 SLSTCTTWNFVTEGSIEDGSIGYHNAAPHTVEICANKC 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,905,576
Number of Sequences: 27780
Number of extensions: 314981
Number of successful extensions: 750
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)