Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0839
         (642 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9PYN3 Cluster: ORF163; n=1; Xestia c-nigrum granulovir...    78   2e-13
UniRef50_Q6C265 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    38   0.21 
UniRef50_Q890L1 Cluster: Phosphoglycerate mutase; n=1; Clostridi...    38   0.27 
UniRef50_A4VD93 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q5HNA8 Cluster: Putative uncharacterized protein; n=2; ...    34   2.5  
UniRef50_Q0T7F9 Cluster: Putative periplasmic protein; n=1; Shig...    33   4.4  
UniRef50_UPI00004989B8 Cluster: aminopeptidase; n=1; Entamoeba h...    33   5.9  
UniRef50_Q8IJP7 Cluster: Putative uncharacterized protein; n=5; ...    33   5.9  
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007...    33   7.7  
UniRef50_Q6CJM4 Cluster: DNA repair protein RAD5; n=1; Kluyverom...    33   7.7  

>UniRef50_Q9PYN3 Cluster: ORF163; n=1; Xestia c-nigrum
           granulovirus|Rep: ORF163 - Xestia c-nigrum granulosis
           virus (XnGV) (Xestia c-nigrumgranulovirus)
          Length = 1122

 Score = 77.8 bits (183), Expect = 2e-13
 Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
 Frame = +3

Query: 120 ITLTEPNLGKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFII 299
           I LT   LG+RQ      V  A  N      I+  P++  +D+LFK+++A + +NVD++I
Sbjct: 8   IVLTGDGLGERQRDFYRQVCAAAANGTQLTNIR--PDEPILDKLFKVELALRYQNVDYLI 65

Query: 300 QNLRDEDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFTTAVSKMKNWLYLNLKD 479
             L+  DM  V+R L+++W+ +    + +  ++L   + P M   A +K+   +  N + 
Sbjct: 66  NVLKHGDMSCVTRVLQNQWVFE---SSFINIEYLRQHVIPVMCLRARNKLLAAIANNYQR 122

Query: 480 ELRCQKFYQF-YKEKEFHYAMKFFVHCSQDY 569
           E   ++FYQ+ Y E+ +  A KF +H S D+
Sbjct: 123 E--AEEFYQYCYNERLYKTASKFLLHTSDDF 151


>UniRef50_Q6C265 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 129

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
 Frame = +3

Query: 90  NKITIPMMCPITLTEPNLGKRQFQLNNMVNEAYKNSIS-FAEIQNLPEKSPVDRLFKIDM 266
           N IT P +   T  + N+  R   L   V+ A +   S F +I N  + S  D+   + M
Sbjct: 1   NSITSPYVFHTTTVDTNMSNRSITLLQRVDNATEQLNSKFTDIVNSAKVSSKDKS-ALAM 59

Query: 267 ASKL--RNVDFIIQNLRDEDMLYVSRALKSKWLLDPAHEAMMTPQ 395
            + L   +   ++++L  ED+L+V+R+LK  W+L      +  P+
Sbjct: 60  ETYLVEESTSAMVRSL--EDLLFVTRSLKEAWILGQIRPVVNKPE 102


>UniRef50_Q890L1 Cluster: Phosphoglycerate mutase; n=1; Clostridium
           tetani|Rep: Phosphoglycerate mutase - Clostridium tetani
          Length = 213

 Score = 37.5 bits (83), Expect = 0.27
 Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = +3

Query: 102 IPMMCPITLTEPNLGKRQFQLNNMVNEAYKNSISFAEIQNLPE--KSPVDRLFKIDMASK 275
           IP++C   L E  LGK +   +++++  YK  I      N P+  KS     F + + ++
Sbjct: 75  IPIVCDNRLKEIKLGKWEGMNHDLIDNYYKEEID--NFWNNPKLYKSIGGETF-LQLRNR 131

Query: 276 LRN-VDFIIQNLRDEDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFT 431
           +++ ++ I++  +DE +L V+ A+  K +++   +  +   W E  + PT  T
Sbjct: 132 VKDFLEEILKKHKDETILIVTHAITLKGIMNYIEDLTIDNFWGEPHINPTSLT 184


>UniRef50_A4VD93 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 200

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/87 (19%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = +3

Query: 315 EDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFTTAVSKMKNWLYLNLKDELRCQ 494
           ++M Y+ + L ++ L    H++     +      P++     ++ +   +++L +  +CQ
Sbjct: 69  QNMYYLIKKLSNQQLKYKIHKSSY--YYFPSSFLPSLLLFDSNQNEQVQFIHLINPFQCQ 126

Query: 495 KF-YQFYKEKEFHYAMKFFVHCSQDYI 572
           +  +  +++ +FH ++K F HCS   I
Sbjct: 127 RMIFIVFQQSQFHSSLKVFYHCSSSLI 153


>UniRef50_Q5HNA8 Cluster: Putative uncharacterized protein; n=2;
           Staphylococcus epidermidis|Rep: Putative uncharacterized
           protein - Staphylococcus epidermidis (strain ATCC 35984
           / RP62A)
          Length = 244

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 444 KMKNWLYLNLKDELRCQKFYQFYKEKEFHYAMKFFVHCSQDYINSE 581
           K  N  Y+N+K  L  + +Y+F  +++ HY  K F H S+D I  +
Sbjct: 131 KYNNKEYINMKGILNGKPYYEFNIDQKGHYYDKNFKHTSKDEIEKD 176


>UniRef50_Q0T7F9 Cluster: Putative periplasmic protein; n=1;
           Shigella flexneri 5 str. 8401|Rep: Putative periplasmic
           protein - Shigella flexneri serotype 5b (strain 8401)
          Length = 424

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = +3

Query: 453 NWLYLN-LKDELRCQKFYQFYKEKEFHYAMKF-----FVHCSQDYINSEVR-DILGRLSP 611
           +W+Y N L + L C K + +Y++    Y+MKF        C+QD    E + D L  ++ 
Sbjct: 318 SWMYYNGLGETLDCDKVWDYYEKGAGKYSMKFNKDEYLTRCNQDQKTRETQGDTLPYITL 377

Query: 612 QHF 620
           +H+
Sbjct: 378 KHY 380


>UniRef50_UPI00004989B8 Cluster: aminopeptidase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: aminopeptidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 827

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 285 VDFIIQNLRDEDMLYVSRALKSKWLLDPAHEAMMTPQWLEDEL--FPTMFTTAVSKMKNW 458
           +DF +  +R +D  ++        +L    E+ +  QW+E  +      F T +S ++NW
Sbjct: 715 IDFAVNKVRQQDFCFIM-------ILSLLGESELPCQWVESHIDYINEKFGTGMSSIRNW 767

Query: 459 LYLNLKDELRCQKFYQFYKE 518
           +   L       + YQ+Y +
Sbjct: 768 ILEGLLGHYSSHEKYQYYTQ 787


>UniRef50_Q8IJP7 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 775

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
 Frame = +3

Query: 126  LTEPNLGKRQFQLNNMVNEAYKNSISFAEIQ--NLPEKSPVDR-LFKIDMASKLRNVDFI 296
            +T+    K++FQ N   N  +K      +I+  N+P    V+R L K+      +N D++
Sbjct: 621  ITDEKEKKKEFQ-NGQSNINFKGKKDNKKIEKTNIPALELVERTLTKLFKVLDEKNEDYL 679

Query: 297  IQNLRDEDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFTTAVSKMKN-WLYLNL 473
              N   E +L  +   K K ++D      +      +EL   +      + KN +L+ N+
Sbjct: 680  KINDFIETLLEFN---KKKKIIDIKAICRLNI----NELQGFVGEINAGQQKNPFLHENI 732

Query: 474  KDELRCQKFYQFYKEKEFHYAMKFFVHCSQDY 569
            KD       Y+ YK+K+ HYA      CS+ Y
Sbjct: 733  KDSTN----YELYKKKKIHYASHIHKWCSKTY 760


>UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_00070730;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00070730 - Tetrahymena thermophila SB210
          Length = 5422

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
 Frame = +3

Query: 273  KLRNVDFIIQNLRDEDMLYV-SRALKS--KWLLDPAHEAMMTPQWLEDELFPTMFTTAVS 443
            KL+N D I++N+R  D L+  +  +K     ++  A E +M  +  E +      TT + 
Sbjct: 3369 KLKNCDNILKNIRLNDQLFEDTEGMKEFCAQIMSVASENLMQKE--EIDKLAEDDTTKLI 3426

Query: 444  KMKNWLYLNLKDELRCQKFYQFYKEKEFHYAMKFFVHCSQDYIN 575
            K    L   + DE + ++  + YKEKE     + F   S+DYI+
Sbjct: 3427 KATRQLEKMIVDEYK-KETIEEYKEKERQEIQEAFNTFSKDYIH 3469


>UniRef50_Q6CJM4 Cluster: DNA repair protein RAD5; n=1;
           Kluyveromyces lactis|Rep: DNA repair protein RAD5 -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 1114

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +3

Query: 132 EPNLGKRQFQ---LN-NMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDM 266
           E  +   QFQ   LN N +   Y+ + S A +QNLPE +P + LFK+ +
Sbjct: 348 ENTVSSSQFQDEALNINQLKSFYRITQSAASLQNLPETTPDESLFKLQL 396


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,400,716
Number of Sequences: 1657284
Number of extensions: 10561036
Number of successful extensions: 31020
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31012
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)