Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0839
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.23 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.2  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   1.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 422 NVYNGCQQDEELVIFESQR*TTLSKILSVLQRKRISLCYEIFRTL 556
           N   G    E+L +  S+     +KIL V+++  +  C E+F  L
Sbjct: 372 NFIKGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEEL 416


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  KITIPMMCPITLTEPNLGKRQFQLNNMVNEAYKNSISFAEIQNLPE 230
           K+ I ++ P T+ EP L K +    ++  +  KN+    ++    E
Sbjct: 272 KMPIAIVAPFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKE 317


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  KITIPMMCPITLTEPNLGKRQFQLNNMVNEAYKNSISFAEIQNLPE 230
           K+ I ++ P T+ EP L K +    ++  +  KN+    ++    E
Sbjct: 164 KMPIAIVAPFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKE 209


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 434 RCKHCRKQFIFQPLGRHHSLMSRVQQP 354
           RC+HC +QF+     R H  +   ++P
Sbjct: 39  RCEHCDRQFVQVANLRRHLRVHTGERP 65


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 434 RCKHCRKQFIFQPLGRHHSLMSRVQQP 354
           RC+HC +QF+     R H  +   ++P
Sbjct: 192 RCEHCDRQFVQVANLRRHLRVHTGERP 218


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 363  PTTTSTSVLDSHTTYPRLG 307
            PTTTST+   + T +P  G
Sbjct: 1065 PTTTSTTTRPTTTNWPTQG 1083


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 153 QFQLNNMVNEAYKNSISFAE 212
           QF  N   N+AY N  ++ E
Sbjct: 210 QFNFNYQYNQAYSNYNNYQE 229


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 153 QFQLNNMVNEAYKNSISFAE 212
           QF  N   N+AY N  ++ E
Sbjct: 230 QFNFNYQYNQAYSNYNNYQE 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,470
Number of Sequences: 336
Number of extensions: 2868
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)