Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0839
(642 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC044581-1|AAH44581.1| 523|Homo sapiens PKD2L2 protein protein. 31 2.6
AF182034-1|AAF65622.1| 624|Homo sapiens polycystic kidney disea... 31 2.6
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 31 3.5
U08379-1|AAC50228.1| 530|Homo sapiens Mi-2 autoantigen 240 kDa ... 31 3.5
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 31 3.5
DQ413183-1|ABD85290.1| 306|Homo sapiens methionine adenosyltran... 31 4.6
BC093030-1|AAH93030.1| 334|Homo sapiens methionine adenosyltran... 31 4.6
BC066645-1|AAH66645.1| 334|Homo sapiens methionine adenosyltran... 31 4.6
BC005218-1|AAH05218.1| 323|Homo sapiens methionine adenosyltran... 31 4.6
AY358695-1|AAQ89058.1| 323|Homo sapiens MAT2B protein. 31 4.6
AJ243721-1|CAB56837.1| 323|Homo sapiens dTDP-4-keto-6-deoxy-D-g... 31 4.6
AF182814-1|AAF28477.1| 334|Homo sapiens methionine adenosyltran... 31 4.6
>BC044581-1|AAH44581.1| 523|Homo sapiens PKD2L2 protein protein.
Length = 523
Score = 31.5 bits (68), Expect = 2.6
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 138 NLGKR-QFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNLRD 314
++G+R F+L M+ ++YKN + ++ + D+A + R F +++
Sbjct: 401 SIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQN 460
Query: 315 -EDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFTTAVSKMKNWLYLNLK 476
E M L+ K+ + E Q + E F +F AV K Y+NLK
Sbjct: 461 AEQMKKWKERLEKKYY---SMEIQDDYQPVTQEEFRELFLYAVELEKELHYINLK 512
>AF182034-1|AAF65622.1| 624|Homo sapiens polycystic kidney
disease-like 2 protein protein.
Length = 624
Score = 31.5 bits (68), Expect = 2.6
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Frame = +3
Query: 138 NLGKR-QFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNLRD 314
++G+R F+L M+ ++YKN + ++ + D+A + R F +++
Sbjct: 502 SIGRRPDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQN 561
Query: 315 -EDMLYVSRALKSKWLLDPAHEAMMTPQWLEDELFPTMFTTAVSKMKNWLYLNLK 476
E M L+ K+ + E Q + E F +F AV K Y+NLK
Sbjct: 562 AEQMKKWKERLEKKYY---SMEIQDDYQPVTQEEFRELFLYAVELEKELHYINLK 613
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase
protein.
Length = 2000
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 142 WENVSFNSTTWSMKLTKTVFHLLKFRIYQR 231
W +S+ +W+ +L +FHL+ +R YQR
Sbjct: 554 WVGLSYWHCSWAKELQLEIFHLVMYRNYQR 583
>U08379-1|AAC50228.1| 530|Homo sapiens Mi-2 autoantigen 240 kDa
protein protein.
Length = 530
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 142 WENVSFNSTTWSMKLTKTVFHLLKFRIYQR 231
W +S+ +W+ +L +FHL+ +R YQR
Sbjct: 430 WVGLSYWHCSWAKELQLEIFHLVMYRNYQR 459
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 142 WENVSFNSTTWSMKLTKTVFHLLKFRIYQR 231
W +S+ +W+ +L +FHL+ +R YQR
Sbjct: 554 WVGLSYWHCSWAKELQLEIFHLVMYRNYQR 583
>DQ413183-1|ABD85290.1| 306|Homo sapiens methionine
adenosyltransferase II beta variant 2 protein.
Length = 306
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 155 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 214
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 215 DVATVCRQLAEKRMLDPS 232
>BC093030-1|AAH93030.1| 334|Homo sapiens methionine
adenosyltransferase II, beta protein.
Length = 334
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 166 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 225
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 226 DVATVCRQLAEKRMLDPS 243
>BC066645-1|AAH66645.1| 334|Homo sapiens methionine
adenosyltransferase II, beta protein.
Length = 334
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 166 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 225
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 226 DVATVCRQLAEKRMLDPS 243
>BC005218-1|AAH05218.1| 323|Homo sapiens methionine
adenosyltransferase II, beta protein.
Length = 323
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 155 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 214
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 215 DVATVCRQLAEKRMLDPS 232
>AY358695-1|AAQ89058.1| 323|Homo sapiens MAT2B protein.
Length = 323
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 155 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 214
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 215 DVATVCRQLAEKRMLDPS 232
>AJ243721-1|CAB56837.1| 323|Homo sapiens
dTDP-4-keto-6-deoxy-D-glucose 4-reductase protein.
Length = 323
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 155 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 214
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 215 DVATVCRQLAEKRMLDPS 232
>AF182814-1|AAF28477.1| 334|Homo sapiens methionine
adenosyltransferase regulatory beta subunit protein.
Length = 334
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 144 GKRQFQLNNMVNEAYKNSISFAEIQNLPEKSPVDRLFKIDMASKLRNVDFIIQNL--RDE 317
G++ NN+ + I + E++ L E + K+ ++K N+D Q +
Sbjct: 166 GEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVK 225
Query: 318 DMLYVSRALKSKWLLDPA 371
D+ V R L K +LDP+
Sbjct: 226 DVATVCRQLAEKRMLDPS 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,107,661
Number of Sequences: 237096
Number of extensions: 1563596
Number of successful extensions: 3987
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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