Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0838
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50109-9|CAA90440.2|  367|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z50109-9|CAA90440.2|  367|Caenorhabditis elegans Hypothetical
           protein C09H10.9 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 469 YWIDSRDSFLHQACIGSFNSSNKH 398
           YW D++ ++ H A IG+ + SN H
Sbjct: 226 YWPDNKKTYKHGALIGTCSYSNLH 249


>Z72514-5|CAA96679.5|  818|Caenorhabditis elegans Hypothetical
           protein T10B10.7 protein.
          Length = 818

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -1

Query: 493 IHEILKSIYWIDSRDSFLHQACIGSFNSSNKHK 395
           ++E L+ +Y++  + + +HQ C GSF  ++  K
Sbjct: 192 VNEDLEMVYFLCRKGADVHQRCYGSFFCADDQK 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,593,552
Number of Sequences: 27780
Number of extensions: 233711
Number of successful extensions: 424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)