BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0838
(535 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 25 0.64
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 4.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 6.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.9
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 24.6 bits (51), Expect = 0.64
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -1
Query: 484 ILKSIYWIDSRDSFLHQACIGSFNSSNKHKTQLQPTQL 371
I K ++ +S ++ G+FN +++KT +PT +
Sbjct: 297 IQKGLFLFACTNSCMNPIVYGAFNIRDRNKTSARPTTI 334
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 96 NNYNNYNKHNYNKLY 110
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 329 NNYNNYNKHNYNKLY 343
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 4.5
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 402 NTRPNYNRHSYSQ*Y 358
N NYN+H+Y++ Y
Sbjct: 329 NNYNNYNKHNYNKLY 343
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 418 KNLCTLDAENC 450
K LC DA+NC
Sbjct: 668 KTLCKCDAQNC 678
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 23 HNEKEKLLEERTSC 36
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 23 HNEKEKLLEERTSC 36
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 23 HNEKEKLLEERTSC 36
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 23 HNEKEKLLEERTSC 36
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 256 HNEKEKLLEERTSC 269
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 256 HNEKEKLLEERTSC 269
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 256 HNEKEKLLEERTSC 269
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 256 HNEKEKLLEERTSC 269
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 256 HNEKEKLLEERTSC 269
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 42 HGEAERLLRGRPSC 1
H E E+LL R SC
Sbjct: 245 HNEKEKLLEERTSC 258
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,918
Number of Sequences: 438
Number of extensions: 2786
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -